Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1327 ATGAACAAGAATTCCTCTATCTTTCTCTCTATCTCTTTGTTATTGGATCTCTTCTCTCGTGCTTGCTCTGGAAATTTTGAAGATTTGGCATTTAGGATGGGTAGAACAATTGAGCTGTATGGATTTCCTTGTAATGTTTCTGTGTCCACAGTAAAGCCATTTGTAGAGAACATTACTGGTGAAGATACGGTCTATGCTGTTAAGATAAGGCCAGGCAAAGGTAAAGTTCCAAGAGCATTTGCTATAATTCAATTCACAGATGCAAGGAATGCTTCTTACCTTATCTCCTTGCCGGAGAAAAGCATACGATATGGGAATTCCTATCTTAAGGCTCGAACACTGGAAAAAGATATTGTACCAAAGCCAAAAACATTTTTGCATAGCTTGGACGATGTGAAGGTGCATTTTGGCTGCCAGATCTCAAAGGAAAGATTCTATATTTTATGGAAAGCCGTTACTAAGGAAGTAAACTTTGGGATTGGAATGAGAAAGATACAGTTCCTTCTGTCCTATAGAGGGTTGGATTATAAGCTTGAGCTTTCCTTTGAGAACATTTGGCAGATTGAGCTGCATCGTCCACGTGGTGAAACTGCAGAGTATCTTCTGATTCAGCTATTAGGTGCTCCTCGAGTATTTGAGAAAGATGTGCGCACTTCAGGAAGTATATTTGAAGATCCTCTTCTAAACTATTCTAAAGATATTTCTGATGATCAATGGATCCGGGCAATAGATTTCACTCCTTTTAGCTGTATTGGGCAGTCTTCTCATATATACTTGCAGCTTCCTTCTCATGGACATCTTCCAAATTTCAAGGAAAACTTTGCTTATTATAAGGAAAGTGAGAGGAAGTTCTCTTTGGAGGAAGGACTCCCTTTTTCTAGCAACTTGAATCTAGTCCCTATTGTTTCTCCTCCTCAAGGAACTTACATACCATATGCCATCCTGTTCAAAGTTAACTCATTGCTTCAGCAAGGGTGTCTTGCAGGTCCAGCACTAGATAGTGACTTCTATAGATTGATTGATCCACGTAGAATGGATCGTGATTTCATTGAACATGCTTTAGAGAAAATGTTTTATTCAAAGGAACTCTGCTCTGAACCCTCAGAGTGGCTGATGGATCAGTTCAGAAAGTATCGTGCATCACGGAATCCATCCCGGTCACCTTCCATATCCTTAGATAATGGCTTGGTATATGTTCGCAGGGTTCAGATTACCCCTTGTAAAGTGTATTTCTGTGGCCCAGAGGTTAATGTCTCAAATCGTGTCCTTCGCCATTTCCCTAAGTTCATTGATAACTTCCTACGTGTTTCATTTGTTGATGAGGAGTTGGATAAACTGTTTTCAACAGATTTATCTCCACGTACCTCTTCTAGTGAGCAAAGAAAAACTGAGATCTATATGAGAATTCTTTCCATTCTTAGAGATGGCATTGTAATTGGTGATAAAAAGTTTGAATTTCTAGCATTCTCATCAAGCCAATTGCGGGAGAATTCTTTATGGATGTTTGCTCCTACAAGATGTGGACTTAATGCTGCTGCCATTAGACAGGGGATGGGGAATTTCCGCAACATTAGAAATGTAGCTAAATATGCTGCTAGACTGGGCCAATCTTTTGGTTCATCTACTGAAACTTTAAGTGTTAGCCGGGATGAAACTGAGATGATTCTTGATGTGGTGGTTGAACATGGTGGAATTGAATATGTTTTCTCTGATGGGATTGGGAAGATTTCTGCTAAATTTGCCAGGAAAGTGGCTATAAAATGTGGCCATAAATCATCCACTCCATCTGCTTTTCAGATTCGATATGGTGGGTACAAAGGGGTTGTGGCTGTTGACCCAACATCATCAGTGAAATTATCTCTGAGGAAGAGCATGCTCAAGTATGAATCAGATAATATAAAACTAGATGTCTTGGCATGTAGTAAATTTCAGCCTTGTTATCTGAATCGGCAGATAATCACGCTCTTATCTACTCTTGGAGTCAAGGATCATGTTTTTGAGAAAATACAGAAGGAAGCTATAAACCGACTGAACTCATTACTAACAGATTCATTAAAGGCACAGGAGGCTCTGGACTTGATGTCTCCAGGGGAGATAGCTAATATTCTGAAGGAGATGCTCATCTGCGGTTATAAGCCTGATGCAGAACCTTTTCTTTCAATGATGCTGCAAACATTCAGGGCATCAAAGCTTTTGGAATTGCGACGCAAAACTAGAATTTTGATTCCAAAAGGAAGAGCAATGATGGGATGTCTGGATGAAACAAGAACCTTGGAATATGGTCAAGTATTTGTGCAGTATTCTGTTAACAGGTTCACGCCATTGTCTGATGATTCTGCTGCGTATGGCTCTGAGACATCTTATATAGTTACAGGTGAGGTAGTTGTTGCAAAAAACCCATGCTTGCATCCAGGTGATGTACGTGTTTTGAAGGCTGTTAATGTGCCAGCTCTTCATCACATGGTCGATTGTGTTGTTTTCCCTCAAAAAGGATCCAGACCTCATCCCAATGAGTGTTCGGGAAGTGATCTAGATGGAGACATCTACTTTGTTTGTTGGGACCCTGAACTAATTCCTCCTCGCCAAATCTCGCCAATGGATTATACTCCAGCACAAAGTATACAATTGGATCATGATGTCATGATAGAGGAGGTTGAGGAATACTTTGCCAACTATCTAGTCAATGACAGTCTAGGAATAATTGCAAATGCCCACACTGTCTTCGCAGATAGAGAGCCCAATAAGGCAATGGCTGAACCATGCATTGAGCTTGCAAAGATATTTTCGATTGCCGTTGACTTTCCAAAAACGGGTGTCCCGGCTGTTATACCTCGTGAACTATATGTCAAAGAATATCCAGACTTTATGGAGAAACCTGATAAACCCACCTATGAATCAAAGAATGTGATCGGAAAGCTTTTTAGGGAAGTGAAAGAAATTGCCCCCGAAGCTAACTCTACTCCAGCCTTCACTCGGCAAATGGCTGCAAGGTCGTATGACTCTGATATGGAAGTCGATGGCTTTATGGATTATGTTGATGATGCTTTCTATCACAAAAGCAACTATGACTTCAAGTTGGGGAATTTGATGGATTACTATGGCATCAAGACCGAGGCTGAAATCCTGAGTGGGAATATTATGAGAATGTCCAAGTCTTTTACCAAAAGAAGGGATGCTGAAGCAATTACAATGTCTGTGAGATCCCTAAGAAAAGAAGCTAGGACCTGGTTCAACAGCCGTGGAAGTGCCGAAGATTCTGGGGTGGACGTTCCAATGGCAAAAGCATCTGCTTGGTACCATGTAACTTATCATCCAAGTTTTTGGGGTTGCTACAATGAAGGTTTGAACAGGGATCACTTTCTAAGCTTTGCATGGTGTGTTTACGATAAGCTTGTCACAATCAAGAGGGACAAAGTCAACATTAGAAGGGCTCTTCAACTATCCTCCTTGGAACTCGGGTTTAGCAGTGGGCTGCATTTGTATTGA 3486 0.4085 MNKNSSIFLSISLLLDLFSRACSGNFEDLAFRMGRTIELYGFPCNVSVSTVKPFVENITGEDTVYAVKIRPGKGKVPRAFAIIQFTDARNASYLISLPEKSIRYGNSYLKARTLEKDIVPKPKTFLHSLDDVKVHFGCQISKERFYILWKAVTKEVNFGIGMRKIQFLLSYRGLDYKLELSFENIWQIELHRPRGETAEYLLIQLLGAPRVFEKDVRTSGSIFEDPLLNYSKDISDDQWIRAIDFTPFSCIGQSSHIYLQLPSHGHLPNFKENFAYYKESERKFSLEEGLPFSSNLNLVPIVSPPQGTYIPYAILFKVNSLLQQGCLAGPALDSDFYRLIDPRRMDRDFIEHALEKMFYSKELCSEPSEWLMDQFRKYRASRNPSRSPSISLDNGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPKFIDNFLRVSFVDEELDKLFSTDLSPRTSSSEQRKTEIYMRILSILRDGIVIGDKKFEFLAFSSSQLRENSLWMFAPTRCGLNAAAIRQGMGNFRNIRNVAKYAARLGQSFGSSTETLSVSRDETEMILDVVVEHGGIEYVFSDGIGKISAKFARKVAIKCGHKSSTPSAFQIRYGGYKGVVAVDPTSSVKLSLRKSMLKYESDNIKLDVLACSKFQPCYLNRQIITLLSTLGVKDHVFEKIQKEAINRLNSLLTDSLKAQEALDLMSPGEIANILKEMLICGYKPDAEPFLSMMLQTFRASKLLELRRKTRILIPKGRAMMGCLDETRTLEYGQVFVQYSVNRFTPLSDDSAAYGSETSYIVTGEVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPPRQISPMDYTPAQSIQLDHDVMIEEVEEYFANYLVNDSLGIIANAHTVFADREPNKAMAEPCIELAKIFSIAVDFPKTGVPAVIPRELYVKEYPDFMEKPDKPTYESKNVIGKLFREVKEIAPEANSTPAFTRQMAARSYDSDMEVDGFMDYVDDAFYHKSNYDFKLGNLMDYYGIKTEAEILSGNIMRMSKSFTKRRDAEAITMSVRSLRKEARTWFNSRGSAEDSGVDVPMAKASAWYHVTYHPSFWGCYNEGLNRDHFLSFAWCVYDKLVTIKRDKVNIRRALQLSSLELGFSSGLHLY 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1327 1161 PANTHER RNA-DEPENDENT RNA POLYMERASE 35 1138 IPR007855 GO:0003968
Lele54g1327 1161 Pfam RNA dependent RNA polymerase 404 977 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1327 Lele-ChrLele54 18330299 18338180 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1327 54 18330299 18338180 Lele55g0124 55 804090 811156 hybridization
Lele54g1327 54 18330299 18338180 Lele56g0128 56 1232634 1245745 hybridization