Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1353 ATGAAAGTTTTGGGATTATTATTATTATTATTATGAGGCTGGGGCCCATCTGTACGGACTAGTGCATCGCCATTGGCGGATTCCTCGAAGATTCTCTTTTCCCCGAAAATCCGATGTAAAAGATACACATGTTTGCGGCAGAACAAAAATTCCCCTCTCTTTCTCTCTTCGTGCTCGGATCTCTGGTCTCGTGATTGCTCTGGAAATTTTGAAGAGTTGGCATTTAGGATGGGTAGAACAATTGAGCTGTATGGATTCCCCTCTAATGTTTCTGTGTCCACAGTAAAACCATTTGTAGAGAGAATTACTGGTGAAGATACTGTCTTTGCTATTAAGATAAGGCAAGGCAAAGGTAAAGTTCCAAGAGCATTTGCTATCGTTCAATTCAAAGATGCAAAGAATGCTTCTTACCTTGTCTCCTTGCCGGACAAAAGCATATGGTATGGAAAATCCTATCTTAAGGCTCGAGCACTGGAAAAAGATATTGTGCCAAAGCCAACAAAATTTTTGCATAGCTTGGAGGATGTGAACCTGCATTTTGGATGCCAGATCTCAAAGGAAAGATTCTATATTTTATGGAAAGCAGTTGCTAAGGAAGTAAACTTTGGGATTGGGATGAGAAAGATACAGTTCCTTCTGTCCTATAGACGGTTGGATTATAAGCTTGAGCTTTCCTATGAGAACATTTGGCAGATTGAGCTGCATCGTCCACGTGGTGAAACTGCAGAGTATCTTCTGATTCAGCTATTAGGTGCTCCTCGAGTATTTGAGAAAGATGTGCGCACTTCAGTAAGTATATTTGAAGATCCTCTTCTCAACTATTGTAAAGATATTTCTGATGATCAATGGTTCCGGGCAATAGATTTCACTCCTTATAGCTCTATTGGGCAGTCTTCTCATATATACTTGCAGCTTCCTTCTCATGGACATCTTCCAAATTTCAAGGAAAACTTTGCTTACTATAAGGAAAGTGATAGGAAGCTCTCTTTGGAGGAAGGACTCCCTTTTTCTAGCAACTTGAATCTAGTCCCTATGGTTTCTCCTCCTCAAGGAAGTTACATACCATACGACATCCTTTTCAGAGTTAACACATTGCTTCAGCAGGGGTGTCTTGCAGGTCCAGCACTAGATGATGGCTTTTATCGCTTGATTGATCCAGGTAGAATGGACCGTGCTTTCATTGAACATGCTTTAGAGAAAATGTATTATTCAAAGGAACTCTGCTCTGAACCCTCAAAGTGGCTGATGGATCAGTTCAGAAAGTATCGTGCATCACAGAATCCATCCCGGTCACCTTCCATATCCTTAGATAATGGCTTGGTGTATGTTCGCAGGGTTCAGATTACCCCTTGTAAAGTGTATTTCTGTGGCCCAGAGGTTAATGTCTCAAATCGTGTCCTTCGCCATTTCCATGAGTTCATTGATAACTTCCTACGTGTTTCATTCGTTGACGAGGAGTTGGATAAACTGTTTGCAACAGATTTATCTCCACGTACCTCTTCTAGCGAGCAAAGAAAAACTGAGATCTATACAAGAATTCTTTCCATTCTTAGAGATGGCATAGTAATAGGTGATAAAAAGTTTGAATTTCTAGCATTCTCATCAAGTCAATTGCGGGAGAATTCTTTATGGATGTTTGCTCGTACAAGATGTGGACTTGATGCTGCTGCCATTAGAGAGTGGATGGGGAAGTTTCGCAAAATTAGAAATGTCGCTAAATATGCTGCTAGACTGGGCCAATCTTTTGGTTCATCAACTGAAACTTTAAGTGTTAACCGGGATGAAACTGAGATGATTCCTGATGTGGTGGTTAAACGTGATGGAATTGACTATGTTTTCTCTGATGGGATTGGGAAGATTTCTGCTAAATTTGCCAGGAAAGTGGCTATCAAATGTGGCCATAAATCATCCACTCCATCTGCCTTTCAGATTCGATATGGTGGGTACAAAGGGGTTGTGGCTGTTGACCCAACATCATCAGTGAAATTATCTCTGAGGAGGAGCATGCTCAAGTATGAATCAGATAATACAAAACTAGATGTCTTGGCATGTAGTAAATTTCAGCCTTGTTATCTGAATCGGCAGATAATCACGCTCTTATCTACTCTTGGTGTCAAGGATCATGTTTTTGAGAAAAAACAGAAGGAAGCTATAAACCAACTGAACTCATTACTAACAGATTCATTAAAGGCACAGGAGGCTCTGGACTTGATGTCTCGTGGGGAGATAGCTAATATTCTGAAGGAGATGCTCATCTGCGGTTATAAGCCTGATGCAGAACCTTTTCTTTCAATGATGCTGCAAACATTCAGGGCATCAAAACTTTTGGAATTGCGACGCAAAACTAGAATTTTTGTTCCAAATGGAAGAGCGATGATGGGATGTCTAGATGAAACAAGAACCTTGGAATATGGTCAAGTATTTGTGCATTATTCTGATAGCAGGTTCACGCCATTGTCTGATGATTCTGCTGCGTATGGCTCTGAGAGATCTTATATAGTTACAGGTAACGTAGTTGTTGCAAAAAACCCATGCTTGCATCCAGGTGATGTACGTGTTTTGAAGGCTGTTAATGTGCCAGCTCTTCATCACATGGTCGATTGTGTTGTTTTCCCTCAAAAAGGATCCAGACCCCATCCCAATGAATGTTCGGGAAGTGATCTAGATGGAGACATCTACTTTGTTTGTTGGGACCCAGAATTGATTCCACGTCGCCAAATCTTGCCAATGGATTATACTCCGGCTCAAACTATACAATTGGATCATGATGTCATGATAGAGGAAGTTGAGGAATACTTTGCCAACTATCTAGTCAATGACAGTCTAGGAATAATTGCAAATGCCCACACTGTCTTCGCAGACAGAGAGCCCGTTAAGGCAATGGCTAAACCATGCATTGAGCTTGCAAAGCTATTTTCGATTGCCGTTGACTTTCCGAAAACCGGTGTCCCGGCTGTTATACCTCGTGAACTATATGTCAAAGAATATCCAGACTTCATGGAGAAACCCGATAAACCCACCTATGAATCAATGAATGTGATCGGAAAGCTTTTTAGGGAAGTGAAAGAAATTGCACCAGAAGCTACCTCTACTCCAGCCTTCACTCGGCAAATGGCTCAGGAGTCGTATGACTCCGATATGGAAATCGAAGGCTTTATGGATTATGTTGATGATGCTTTCTATCACAAAAGCAACTATGACTTCAAGTTGGGGAATTTGATGGATTACTATGGCATCAAGACCGAGGCCGAAATCCTGAGTGGGAATATTATGAGCATGTCCAAATCTTTTACCAAAAGAAGGGATGCAGAAGCAATTACAATGGCTGTGAGATCCCTAAGAAAAGAAGCTAGGACCTGGTTCAACAGCCGTGGAAGTGCACAAGATTCTGAGCTGGATGATCCGATGGCAAAAGCATCTGCTTGGTACCATGTAACTTATCACCCAAGTTTTTGGGGTTGCTACAATGAAGGTATGAACAGGGATCACTTTCTAAGCTTCGCATGGTGTGTTTACGATAAGCTTGTCACAATCAAGCGGGACAAAGTCAGCATTAGAAGGTCTCTCCAACTATCTTCCTTGGAACGCAAGTTTAGCAGTGGGCTGCATTTGTATTAA 3618 0.4149 MKVLGLLLLLLXGWGPSVRTSASPLADSSKILFSPKIRCKRYTCLRQNKNSPLFLSSCSDLWSRDCSGNFEELAFRMGRTIELYGFPSNVSVSTVKPFVERITGEDTVFAIKIRQGKGKVPRAFAIVQFKDAKNASYLVSLPDKSIWYGKSYLKARALEKDIVPKPTKFLHSLEDVNLHFGCQISKERFYILWKAVAKEVNFGIGMRKIQFLLSYRRLDYKLELSYENIWQIELHRPRGETAEYLLIQLLGAPRVFEKDVRTSVSIFEDPLLNYCKDISDDQWFRAIDFTPYSSIGQSSHIYLQLPSHGHLPNFKENFAYYKESDRKLSLEEGLPFSSNLNLVPMVSPPQGSYIPYDILFRVNTLLQQGCLAGPALDDGFYRLIDPGRMDRAFIEHALEKMYYSKELCSEPSKWLMDQFRKYRASQNPSRSPSISLDNGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFHEFIDNFLRVSFVDEELDKLFATDLSPRTSSSEQRKTEIYTRILSILRDGIVIGDKKFEFLAFSSSQLRENSLWMFARTRCGLDAAAIREWMGKFRKIRNVAKYAARLGQSFGSSTETLSVNRDETEMIPDVVVKRDGIDYVFSDGIGKISAKFARKVAIKCGHKSSTPSAFQIRYGGYKGVVAVDPTSSVKLSLRRSMLKYESDNTKLDVLACSKFQPCYLNRQIITLLSTLGVKDHVFEKKQKEAINQLNSLLTDSLKAQEALDLMSRGEIANILKEMLICGYKPDAEPFLSMMLQTFRASKLLELRRKTRIFVPNGRAMMGCLDETRTLEYGQVFVHYSDSRFTPLSDDSAAYGSERSYIVTGNVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPRRQILPMDYTPAQTIQLDHDVMIEEVEEYFANYLVNDSLGIIANAHTVFADREPVKAMAKPCIELAKLFSIAVDFPKTGVPAVIPRELYVKEYPDFMEKPDKPTYESMNVIGKLFREVKEIAPEATSTPAFTRQMAQESYDSDMEIEGFMDYVDDAFYHKSNYDFKLGNLMDYYGIKTEAEILSGNIMSMSKSFTKRRDAEAITMAVRSLRKEARTWFNSRGSAQDSELDDPMAKASAWYHVTYHPSFWGCYNEGMNRDHFLSFAWCVYDKLVTIKRDKVSIRRSLQLSSLERKFSSGLHLY 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1353 1205 Pfam RNA dependent RNA polymerase 448 1021 IPR007855 GO:0003968
Lele53g1353 1205 PANTHER RNA-DEPENDENT RNA POLYMERASE 79 1182 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1353 Lele-ChrLele53 21723886 21731951 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1353 53 21723886 21731951 Lele55g0124 55 804090 811156 hybridization
Lele53g1353 53 21723886 21731951 Lele56g0128 56 1232634 1245745 hybridization