Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0085 ATGTGGTGGCTCAGCTGTCTCGTCGCACCTCCTTCCGCAAACCCCGATCTGGGAGCCGCCGTCAGCAAAGCCACCAGCCACGATCAACATCGCATCGATTGCAAGAACGTTCAACGTTTCTTCCAATGGGTTCGCACCTCTCCCCTATACCTCAAGCCCCTCGTCTGGGCCCTCGCCATGCGAATGCAGAAGACTCGAAGCTGGGTCGTCGCCCTCAAGGGCCTGATGCTCATGCACGGCATTTATTGCTGTGATCTCGCCATTATTCGAAAGATGGGTCGATTTCCCTTCGATCTTACCAATTTCCACGATGAACATGTCAACCCAGATAAGGCTTGGGCTTACGACACTTTTGTTCGTTCGTATTTTGCTAAATTCTGCAAAGGGATCGCTCGAGCTCTGTTGAGGATATATGATATTTGCGGGAAGATGGAGGCTAGTGTTGGGCTTAAGGTTCTTCAGAAAGCAGCAATCCAGAGCGATCAGATTTCTATATCTTTGATTTCTGTAGGGAAATTGGCGTCCTCAACGCTTCTCAATGCCCCAAAATGGAGAGATTCCCTAAAGGACAAAGCCATTGTGTCGTACGTTAATGCCATTGCCTGCAAGGATGAACACAAGGGATCAGGGGGCATGAAGACGATAATCACAGAAAAGTGGGAGGTTTTCGAGGATGAAATTGTTCTTGATGATAGAGCCGAAGTTACTTTCTCAACCAACCCTTTTGAAGAATCATATTGCATCGTTCCCTACCAAGCAGTTCATAACCAAGTTCGTCCGGATTTAATTAGTTTTTAG 798 0.4774 MWWLSCLVAPPSANPDLGAAVSKATSHDQHRIDCKNVQRFFQWVRTSPLYLKPLVWALAMRMQKTRSWVVALKGLMLMHGIYCCDLAIIRKMGRFPFDLTNFHDEHVNPDKAWAYDTFVRSYFAKFCKGIARALLRIYDICGKMEASVGLKVLQKAAIQSDQISISLISVGKLASSTLLNAPKWRDSLKDKAIVSYVNAIACKDEHKGSGGMKTIITEKWEVFEDEIVLDDRAEVTFSTNPFEESYCIVPYQAVHNQVRPDLISF 265
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0085 265 PANTHER CLATHRIN ASSEMBLY PROTEIN 14 123 IPR045192 GO:0048268|GO:0072583
Lele56g0085 265 Pfam ANTH domain 17 124 IPR011417 GO:0005543
Lele56g0085 265 Gene3D - 9 126 IPR008942 -
Lele56g0085 265 SUPERFAMILY ENTH/VHS domain 16 124 IPR008942 -
Lele56g0085 265 CDD ANTH_N_AP180_plant 17 124 - -
Lele56g0085 265 ProSiteProfiles ENTH domain profile. 9 140 IPR013809 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele56g0085 Lele-ChrLele56 959040 960120 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1389 53 21995353 21996479 Lele56g0085 56 959040 960120 hybridization
Lele54g1370 54 18635087 18636040 Lele56g0085 56 959040 960120 hybridization