Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1370 ATGAGGCTCTGGCAGAGAACAGGAACAGCGTCTGGTGGCTCAGCTGTCTCGTCGCACCTCCTTCCGCAACCCCAATCTGGAAGCCGCCGTCATCAAAGCCACCAGCACGATCAATATCGCATCGATTGCAAGAACGTTCAACGTGTCTTCCAATGGGTTCGCACCTCTCCCCTATACCTCAGGCCCCTCCTCTGGGCCCTCGCCATGCGAATGCAGAAGACTCGAAGCTGGGTCGTCGCCCTCAAGGGCCTGATGCTCATGCACGGCATTTATTGCTGTGATCTCGCCATTATTCGAAAGATGGGTCGATTGCCCTTCAATCTCACCAATTTCAGCGATGATCATGTCAACCCAGATAAGGCTTGGGCCTACGACGCTTTTGTTCGTTCGTTTTTTGCGTATTTGGACCAGGAAGCCGCCTTTTCGTCCATTGAATTTTTAAAAAAAAAAAAGAGGAAACAGGGCAAGAAAACAGAGGACACGTTGATGGAAGAATTGGAGAAATTGCAGGCGATGCAGGATTTGATTGACATGCAGCTTCAGATCAAACCTGACTATTCGAATTCACGTGAGGGTCTTATCCTGGAAGCTATGGATTGCGTTATCGTGGAGCTTTTCGACGTGTATAGTAAATTCTGCAAAGGGATCGCTCGAGCTCTGTTGAGGATATATGATATTGGCGGGAAGTTGGATGCCAGTGTTGGGCTTAAGGTTCTTCAGAAAGCAGCAATCCAGAGCGGTCAGCTTTCTATATACTTTGATTTCTTTAGGGAAATTGGCGTCCTCAACGCTTCTCAATGCCCCAAAATGGAGAGATTCCCTGAAGGGTATATGCAAGATGTGGAGAGAATCATCAATGGGGCTGATGAGAAGGAAAACTTGAAGATAAGGCCATTGTGTTGTACGTTAATGCCATTGCCTGCAAGGATGAACACAAGGGATCAGGTGGCATGA 954 0.4811 MRLWQRTGTASGGSAVSSHLLPQPQSGSRRHQSHQHDQYRIDCKNVQRVFQWVRTSPLYLRPLLWALAMRMQKTRSWVVALKGLMLMHGIYCCDLAIIRKMGRLPFNLTNFSDDHVNPDKAWAYDAFVRSFFAYLDQEAAFSSIEFLKKKKRKQGKKTEDTLMEELEKLQAMQDLIDMQLQIKPDYSNSREGLILEAMDCVIVELFDVYSKFCKGIARALLRIYDIGGKLDASVGLKVLQKAAIQSGQLSIYFDFFREIGVLNASQCPKMERFPEGYMQDVERIINGADEKENLKIRPLCCTLMPLPARMNTRDQVA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1370 317 MobiDBLite consensus disorder prediction 1 29 - -
Lele54g1370 317 PANTHER CLATHRIN ASSEMBLY PROTEIN 36 289 IPR045192 GO:0048268|GO:0072583
Lele54g1370 317 SUPERFAMILY GAT-like domain 163 287 - -
Lele54g1370 317 ProSiteProfiles ENTH domain profile. 16 149 IPR013809 -
Lele54g1370 317 MobiDBLite consensus disorder prediction 1 34 - -
Lele54g1370 317 Gene3D ANTH domain 148 298 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele54g1370 317 SUPERFAMILY ENTH/VHS domain 37 138 IPR008942 -
Lele54g1370 317 CDD ANTH_N_AP180_plant 36 137 - -
Lele54g1370 317 Pfam ANTH domain 36 285 IPR011417 GO:0005543
Lele54g1370 317 Gene3D - 32 146 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1370 Lele-ChrLele54 18635087 18636040 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1370 54 18635087 18636040 Lele55g0081 55 517675 518826 hybridization
Lele54g1370 54 18635087 18636040 Lele56g0085 56 959040 960120 hybridization