Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1389 ATGAGCCTCTGGCAGAGACTCGCCGGAGCTCTGAAAGACACGAACAGCTTGTGGGTGGCTCAGCTGTCTCGTCGCACCTCCTTCCGCAACCCCGATCTAGAAGCCGCCGTCATCAAAGCCACCAGCCACGATCAACATCGCATCGATTGCAAGAACGTTCAGCTCGTCTTCCAATGGATGGGTCGATTGCCCTTCGATCTCACCAATTTCAGCGACGATCATGTCAAACCTGATAAGGCTTGGGCTTACAACGATTTCGTTCGTTCGTACTTTGCGTATTTGGACCAGAAATCCGCTTTTTCGTCCATGGAATTTAAAAAACAGAGGAAACGGGGCAAGAAAACAGAGCACACGTTGATGAAAGAATTGGAGAAATTGCAGGCGATGCAGGATTTGATTGACATGCTGCTTCAGATTAAACCTGAGAATTTGACTTCGCATAAGGGTCTTATCCTGGAAGCTATGGATTGCATTATCGTGGAACTTTTCGACATGCATAGTAAATTCTGCAAAGGGATTGCTCGAGCTCTCTTGAGGATATATGACATTGGTGGGAAGATGGAGGCTAGTGTTGGGCTTAAGGTTCTGGAGAAAGCAGCAATCCAGAGCGGTCAGCTTTCTATATACTTCGAGTTCTGTAGGGAAATCGGTGTCCTCAACGCTTCTCAACGCCCCAAAATGGAGCGATTCCCCAAAGGGTATATGAAAGATCTGGAGAGAATCATCATTGGGGCTGATGAGAAGAAGAAAAACTTGACGGGTGATAATGATGAAGACAAGGGCATGCTGTCGTATGTTAATGCCATTGCGTGCAAGGATGAACACAAGGGATCAAATGGCATGAAGACAATAATTACAGAAAAGTGGGTGGTTTTTGATGATGAAATGGCGCTTCATGTTGATGGGGCCAAAGCTACTTTCTCAACCAACCCTTTTGAAGAATCATATTGCATCGTTCCATACCAAGCAGTTCATAACCAAGTTCTTCCGGATTTAATGAGTTTTTAG 1008 0.4563 MSLWQRLAGALKDTNSLWVAQLSRRTSFRNPDLEAAVIKATSHDQHRIDCKNVQLVFQWMGRLPFDLTNFSDDHVKPDKAWAYNDFVRSYFAYLDQKSAFSSMEFKKQRKRGKKTEHTLMKELEKLQAMQDLIDMLLQIKPENLTSHKGLILEAMDCIIVELFDMHSKFCKGIARALLRIYDIGGKMEASVGLKVLEKAAIQSGQLSIYFEFCREIGVLNASQRPKMERFPKGYMKDLERIIIGADEKKKNLTGDNDEDKGMLSYVNAIACKDEHKGSNGMKTIITEKWVVFDDEMALHVDGAKATFSTNPFEESYCIVPYQAVHNQVLPDLMSF 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1389 335 SUPERFAMILY GAT-like domain 118 242 - -
Lele53g1389 335 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 60 IPR045192 GO:0048268|GO:0072583
Lele53g1389 335 Pfam ANTH domain 67 241 IPR011417 GO:0005543
Lele53g1389 335 Gene3D ANTH domain 105 256 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele53g1389 335 SUPERFAMILY ENTH/VHS domain 32 101 IPR008942 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele53g1389 Lele-ChrLele53 21995353 21996479 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1389 53 21995353 21996479 Lele55g0081 55 517675 518826 hybridization
Lele53g1389 53 21995353 21996479 Lele56g0085 56 959040 960120 hybridization