Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1334 ATGTACAAAGAGGGATCTGGAAATAGATGCTTGAGTGATACAGAATCAGATACATTCGCGTTATACACGAAAATACGCGTGAGTAGGGACCGAAGGGAGAAGGAGGAGACAAATAAAGAAGCGCCTACCATTTTTAAAACAGCCACTACTGGGCCTCCAATGGACGCTGGAGCCGCCGCCGCCGTCGACGATCTTCCTATGACGGCTGCCGTATCGCGGTGGAAATTCGTCGTGACCCGGAAGTATCAGCATCTGCTCGACAAAGCGACACCGCACGTCCTCCACCGTTGGATCGCCTGCTTAGTCGTTGTCTTCATCTACGTTGTCCGCGTCTACTTCGTCCAGGGGTTCTACATCGTCTCCTATGGTCTAGGCATTTACATCCTCAACCTTCTCATCGGATTTCTCTCCCCTCAGGTTGACCCCGAGATCCAGCAAATCTCTGATGGTCCATCCCTTCCCACCAGGGGGTCTGATGAATTCCGTCCCTTCGTTCGCCGGCTCCCGGAGTTTAAGTTCTGGTACTCGATCACAAAGGCATTTTGGATCGCGTTTGTGATGACCTTTTTTAGCGTATTTGATGTACCTGTGTTTTGGCCAATTCTTCTCTTCTACTGGGTAGTCCTATTCTCCCTTACCATGAGGAGACAGATATCTCACATGATCAAATACAGATACGTGCCATTCACATTTGGGAAACAGCGCTATAATGGAAAGAGAACGACGGAAGAGAGCGCAGCCCTTCTTCCTAGGGACGGAATCCTTCAGGTTGACTGA 777 0.4994 MYKEGSGNRCLSDTESDTFALYTKIRVSRDRREKEETNKEAPTIFKTATTGPPMDAGAAAAVDDLPMTAAVSRWKFVVTRKYQHLLDKATPHVLHRWIACLVVVFIYVVRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQQISDGPSLPTRGSDEFRPFVRRLPEFKFWYSITKAFWIAFVMTFFSVFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYRYVPFTFGKQRYNGKRTTEESAALLPRDGILQVD 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1334 258 PANTHER PROTEIN RER1 66 241 IPR004932 GO:0016020
Lele55g1334 258 Pfam Rer1 family 77 237 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1334 Lele-ChrLele55 19812986 19818209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1334 80 246 Miscellaneous Gene Families AT4G39220 74.251 5.46e-94 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0151 53 1211210 1212856 Lele55g1334 55 19812986 19818209 hybridization
Lele54g0151 54 1271091 1272801 Lele55g1334 55 19812986 19818209 hybridization