Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0151 ATGGACGCGGGAGCAGCCGGCGCCGGCGTCTCCGTCGACGATCTTCCTATGACGGCTGCCTTATCGGGGTGGAAATTCGCCGTGACCCGGAAGTATCAGCATCTGCTCGACAAAGCGACACCGTACGTCTTCCACCGTTGGATCGCCTGCTTAGTCGTGGTCTTCATCTACGTTGTCCGCGTCTACTTCGTCCAGGGGTTCTACATCGTCTCCTATGGTCTAGGCATTTACATCCTCAACCTTCTCATCGGATTTCTCTCCCCTCAGGTTGACCCCGAGATCCAGGAAATCTCTGATGGTCCATCCCTTCCCACCAGGGGGTCTGATGAATTCCGTCCTTTCGTTCGCCGGCTCCCGGAGTTTAAGTTCTGGTACTCGATCACAAAGGCATTTTGCATTGCGTTTGTGATGACCTTTTTTAGTGTATTTGATGTACCTGTGTTTTGGCCAATTCTTCTCTTCTACTGGGTAGTCCTATTCTCCCTTACCATGAGGAGACAGATATCTCACATGATCAAATACAGATACGTGCCATTCACATTTGGGAAACAGCTGGAGCAATCTGAGTTTATGCCTGACTACCTCGAGGACAGGTTTGGGTTCTGGTGTGGGCGATTGCCATACTCCTATTGCTGA 636 0.511 MDAGAAGAGVSVDDLPMTAALSGWKFAVTRKYQHLLDKATPYVFHRWIACLVVVFIYVVRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQEISDGPSLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYRYVPFTFGKQLEQSEFMPDYLEDRFGFWCGRLPYSYC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0151 211 Pfam Rer1 family 27 184 IPR004932 GO:0016020
Lele54g0151 211 PANTHER PROTEIN RER1 17 185 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0151 Lele-ChrLele54 1271091 1272801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0151 1 184 Miscellaneous Gene Families AT4G39220 69.565 1.83e-90 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0151 54 1271091 1272801 Lele55g1334 55 19812986 19818209 hybridization
Lele54g0151 54 1271091 1272801 Lele56g1286 56 16118746 16120131 hybridization