Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0151 ATGGAAGCTGGAGCAGCCGCCGCCGTTGACGATCTTCTTGTGACGGCTGCCATATCGCGGTGGAAATTCGCCGTGACCCGGAAGTTTCAGCATCTGCTCGACAAAGCGACACCGCACGTCCTTCACCGTTGGATCGCCTGCTTAGTCGTTGTCTTCATCTACGTTGTCCGCGTCTACTTCGTCCAGGGGTTCTACATCGTCTCATATGGTCTAGGCATTTACATCCTCAACCTTCTTATCGGATTTCTCTCCCCTCAGGTTGACCCCGAGATCCAGGAAATATCTGATGGTCCATCCCTTCCCACCAGGGGTTCTGATGAATTCCGTCCCTTCGTTCGCCGGCTCCCGGAGTTTAAGTTCTGGTACTCGATCACAAAGGCATTTTGCATCGCGTTTGTGATGACCTTTTTTAGCGTATTTGATGTACCTGTGTTTTGGCCAATTCTTCTCTTCTACTGGGTAGTCCTATTCTCCCTTACCATGAGGAGACAGATATCTCACATGATCAAATACAGATACGTGCCATTCACATTTGGTAAACAGGTAAAATGTTTCTTGTTTTTAGTTGTCACAGATGTGGTGTGCGTTCAGTTTGAACGCTATGATGGAAAGAGAACAACGGAAGAGAGCGCAGCCCTTCTTCCTAGGGACGGAATCCTTCAGGTGGGCAATTGCCATACTCCTATTGCTGAATTCTTATTTAAATGA 708 0.4802 MEAGAAAAVDDLLVTAAISRWKFAVTRKFQHLLDKATPHVLHRWIACLVVVFIYVVRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQEISDGPSLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYRYVPFTFGKQVKCFLFLVVTDVVCVQFERYDGKRTTEESAALLPRDGILQVGNCHTPIAEFLFK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0151 235 PANTHER PROTEIN RER1 14 182 IPR004932 GO:0016020
Lele53g0151 235 Pfam Rer1 family 23 181 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0151 Lele-ChrLele53 1211210 1212856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0151 7 181 Miscellaneous Gene Families AT4G39220 70.286 6.46e-92 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0151 53 1211210 1212856 Lele55g1334 55 19812986 19818209 hybridization
Lele53g0151 53 1211210 1212856 Lele56g1286 56 16118746 16120131 hybridization