Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1132 ATGTCTTCCAAAGCTAAAGCTTTGTTGTTCATCTTCATGATTTCAACATTGAGTTCTCTTTTACCGCTAACATATGCTTGTGGTGATGATCCTTACTGCCACTGGCATTGTCATCCCAAAACCAAGTGCCACAAACCGCCTCATCAGGGCGGACACCCGAAAAAGTCGCCTCCAAGACCGCCGGTCATTATCATGCCTCCACCAGTATCATCCCCGCCGATCATTGTTAAGCCGCCACCATCATCTCCGCCAGTAATTGTCCCACCAATCATTGTCAGGCCTCCGCCAACATCCCCACCTATCATTGTCAAGCCACCACCAGTATCCCCGCCGATCATTGTCAAGCCGCCACCATCATCCCCGCCAGTCATTGTCAAGCCGCCACCGGTGTCCCCGCCGGTTATAATAAACCCGCCGCCGTACTGGGTTCCTATTCCTCCTCCTCAAGTGACGTGCCCCATTGATGCCCTAAAGCTGGGGCTGTGTTTGGATGTGCTTGGAGGACTTGTGCATGTGGGAATAGGGAACCCTATTGAGAATATATGCTGTCCAGTGATTCAAGGATTGCTTGATCTTGAAGCAGCGATATGCCTTTGCACTGTTATCAGACTTAAGCTTCTGAATCTCAACGTATTCGTTCCTCTTGCTCTTCAAGTTCTTGCTACTTGTGGCTTCGCTCCTCCACCAGGTTTTGTTTGTCCACCTTTATTATAA 714 0.4972 MSSKAKALLFIFMISTLSSLLPLTYACGDDPYCHWHCHPKTKCHKPPHQGGHPKKSPPRPPVIIMPPPVSSPPIIVKPPPSSPPVIVPPIIVRPPPTSPPIIVKPPPVSPPIIVKPPPSSPPVIVKPPPVSPPVIINPPPYWVPIPPPQVTCPIDALKLGLCLDVLGGLVHVGIGNPIENICCPVIQGLLDLEAAICLCTVIRLKLLNLNVFVPLALQVLATCGFAPPPGFVCPPLL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1132 237 Pfam Hydrophobic seed protein 151 234 IPR027923 -
Lele55g1132 237 Gene3D - 147 235 IPR036312 -
Lele55g1132 237 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Lele55g1132 237 PANTHER - 14 233 - -
Lele55g1132 237 CDD HPS_like 151 233 IPR027923 -
Lele55g1132 237 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 154 235 IPR036312 -
Lele55g1132 237 SMART aai_6 152 233 IPR016140 -
Lele55g1132 237 MobiDBLite consensus disorder prediction 43 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1132 Lele-ChrLele55 17788868 17789581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1132 151 235 Acyl Lipid Metabolism Gene Families AT4G22490 35.294 5.96e-08 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0355 53 3127438 3128169 Lele55g1132 55 17788868 17789581 hybridization
Lele54g0363 54 3135038 3135670 Lele55g1132 55 17788868 17789581 hybridization