Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0363 ATGTCTTCAAAAGCTAAAGCCTTGTTGTTCATCTTCATAATTTCAACATTGAGCTCTCTTACAGCACTAACATATGCTTGTGGTGATGATCCTTATTGCCACTGGCATTGTCATCCCAAAACCAAGTGCCACAAACCGCCTCATCATGGCGGCGGCCACCCGAAAGTGTCTCCTCCAAAGCCACCGGTCGTTCTCCCGCCGATCATTGTCAAGCCGCCACCAGCATCCCCGCCGATCATTGTCAAGCCCCCACCAGCATCCCCTCCAATCATTGTCAAGCCGCCACCAGTATCCCCGCCGGTTATAATAAACCCGCCACCGGTTGCACCTTCACCGCCATACTGGGTTCCTAGTCCTCCTCCTCAAGTGAGGTGTCCCATTGATGCCCTAAAGCTAGGGCTGTGTTTGGATGTGCTTGGAGGACTTGTGCATGTGGGAATAGGGAACCCTATTGAGAATATATGCTGTCCAGTGATCCAAGGATTGCTTGATCTTGAAGCAGCGATATGTCTTTGCACTGTTATCAGACTTAAGCTTCTGAATCTCAACATATTCGCTCCTCTTGCTCTTCAAGTTCTTGCTACTTGTGGCTTCACTCTTCCTCCTGGTTTTGTTTGTCCACCTTTATTATAA 633 0.4897 MSSKAKALLFIFIISTLSSLTALTYACGDDPYCHWHCHPKTKCHKPPHHGGGHPKVSPPKPPVVLPPIIVKPPPASPPIIVKPPPASPPIIVKPPPVSPPVIINPPPVAPSPPYWVPSPPPQVRCPIDALKLGLCLDVLGGLVHVGIGNPIENICCPVIQGLLDLEAAICLCTVIRLKLLNLNIFAPLALQVLATCGFTLPPGFVCPPLL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0363 210 PANTHER - 13 206 - -
Lele54g0363 210 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Lele54g0363 210 Pfam Hydrophobic seed protein 124 207 IPR027923 -
Lele54g0363 210 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 127 208 IPR036312 -
Lele54g0363 210 Gene3D - 119 208 IPR036312 -
Lele54g0363 210 SMART aai_6 125 206 IPR016140 -
Lele54g0363 210 CDD HPS_like 124 206 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0363 Lele-ChrLele54 3135038 3135670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0363 125 208 Acyl Lipid Metabolism Gene Families AT4G22490 35.714 1.61e-08 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0363 54 3135038 3135670 Lele55g1132 55 17788868 17789581 hybridization
Lele54g0363 54 3135038 3135670 Lele56g1080 56 14233574 14234173 hybridization