Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0355 ATGTCTTCCAAAGCTAATGCTTTGTTGTTCATCTTCATGATTTCAACATTGAGTTCTCTTTTTCCACTAACATATGCTTGTGGTTATGATCCTTACTGCCACTGGCATTGTCATCCCAAAACCAAGTGCAACAAACCGCCTCATCATGGCGGACACCCGAAAAAGTCGCCTCCAAAACCGCCGGTCATTATCATGCCGCCACCAGTATCATCCCCGCCGATTATTGTCAAGCCGCCACCATCATCCCCGCCAGTAATTGTCCCACCGATCATTGTCAAGCCTCCGCCAACATACCCACCTATCATTGTCAAGCCACCACCAGTATCCCCGCCGATCATTGTCAAGCCGCCACCATCATCCCCGCCAGTCATTGTCACCCCGCCGCCGGTGTCCCCGCCTGTTATAATAAACCCGCCACCAGTGGTACCTTCGCCGCCGTACTGGGTTCCTAGTCCTCCTCCTCAAGTGACGTGCCCCATTGATGCCCTAAAGCTAGGGCTGTGTTTGGATGCGCTTGGAGGACTTGTGCATGTGGGAATAGGGAACCCTATTGAGAATATATGCTGCCCAGTGATTCAAGGATTGCTTGATCTTGAAGCGGCGATATGCCTTTGCACTGTTATCAGACTCAAGCTTCTGAATCTCAACGTATTCGTTCCTCTTGCTCTTCAAGTTCTTGCTACTTGTGGCTTCGCTCCTCCACCAGGTTTTGTTTGTCCACCTTTATTATAA 732 0.5014 MSSKANALLFIFMISTLSSLFPLTYACGYDPYCHWHCHPKTKCNKPPHHGGHPKKSPPKPPVIIMPPPVSSPPIIVKPPPSSPPVIVPPIIVKPPPTYPPIIVKPPPVSPPIIVKPPPSSPPVIVTPPPVSPPVIINPPPVVPSPPYWVPSPPPQVTCPIDALKLGLCLDALGGLVHVGIGNPIENICCPVIQGLLDLEAAICLCTVIRLKLLNLNVFVPLALQVLATCGFAPPPGFVCPPLL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0355 243 Pfam Hydrophobic seed protein 157 240 IPR027923 -
Lele53g0355 243 PANTHER - 14 239 - -
Lele53g0355 243 CDD HPS_like 157 239 IPR027923 -
Lele53g0355 243 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 160 241 IPR036312 -
Lele53g0355 243 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Lele53g0355 243 SMART aai_6 158 239 IPR016140 -
Lele53g0355 243 Gene3D - 152 241 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0355 Lele-ChrLele53 3127438 3128169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0355 157 241 Acyl Lipid Metabolism Gene Families AT4G22490 34.118 2.82e-07 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0355 53 3127438 3128169 Lele55g1132 55 17788868 17789581 hybridization
Lele53g0355 53 3127438 3128169 Lele56g1080 56 14233574 14234173 hybridization