Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1131 ATGGCTTCCAAAACTTCCTCTTTCGCTCTTTTCGTTGTCCTCAACCTCCTCTTCTTCTCACTTGTCACTGCATGCGGCTCATGCGGAGGCGGCTACCCTAACCCTAAGCCAAACCCGAAACCCAAGCCCAACCCGAAGCCTAAGCCAAACCCGAACCCTAGCCCTTCGGGTGGAAGTGGCACATGCCCTCGTGATGCCCTAAAACTAGGGGTGTGTGCTAATGTTCTGAAAGGTTTGCTTAATGTGACCCTTGGACAGCCACCAGTGGCCCCTTGTTGCTCTCTGATTCAAGGACTTGCCGACCTTGAAGCCGCCGTGTGCCTCTGCACTGCCCTTAAAGCTAACATTTTGGGCATTAACCTCAACCTTCCTATCTCTCTCAGTTTGCTTCTCAATGTTTGCTCTAAGAATGTTCCTCGTGGTTACCAATGTGCCTGA 438 0.516 MASKTSSFALFVVLNLLFFSLVTACGSCGGGYPNPKPNPKPKPNPKPKPNPNPSPSGGSGTCPRDALKLGVCANVLKGLLNVTLGQPPVAPCCSLIQGLADLEAAVCLCTALKANILGINLNLPISLSLLLNVCSKNVPRGYQCA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1131 145 CDD HPS_like 60 144 IPR027923 -
Lele55g1131 145 Gene3D - 61 145 IPR036312 -
Lele55g1131 145 MobiDBLite consensus disorder prediction 35 62 - -
Lele55g1131 145 SMART aai_6 62 144 IPR016140 -
Lele55g1131 145 Pfam Hydrophobic seed protein 61 145 IPR027923 -
Lele55g1131 145 PANTHER - 6 144 - -
Lele55g1131 145 MobiDBLite consensus disorder prediction 35 56 - -
Lele55g1131 145 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lele55g1131 145 FunFam pEARLI1-like lipid transfer protein 1 60 145 - -
Lele55g1131 145 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 64 144 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1131 Lele-ChrLele55 17781373 17781810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g1131 52 144 Acyl Lipid Metabolism Gene Families AT4G22490 36.559 5.70e-16 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0356 53 3135142 3135543 Lele55g1131 55 17781373 17781810 hybridization
Lele54g0364 54 3142779 3143168 Lele55g1131 55 17781373 17781810 hybridization