Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0356 ATGGCTTCCAAAACTTCCTCTTTCGCTCTTTTCCTTGTCCTCAACCTCCTCTTCTTCTCACTTGTCACTGCATGCGGCTCATGCGGGGGCGGCTACCCTAACCCTAAGCCAAACCCGAACCCTAGCCCTTCGGGTGGAAGTGGCACATGCCCTCGTGATGCCCTAAAACTAGGGGTGTGTGCTAATGTTCTGAAGGGTTTGCTTAATGTGACCCTTGGACAGCCACCAGTGGCCCCTTGTTGCTCTCTGATTCAAGGACTTGCCGACCTTGAAGCCGCCGTGTGCCTCTGCACTGCCCTTAAAGCTAACATTTTGGGCATTAACCTCAACCTTCCTGTCTCTCTCAGTTTGCTTCTCAATGTTTGCTCTAAGAATGTTCCTCGTGGTTACCAATGTGCCTGA 402 0.5174 MASKTSSFALFLVLNLLFFSLVTACGSCGGGYPNPKPNPNPSPSGGSGTCPRDALKLGVCANVLKGLLNVTLGQPPVAPCCSLIQGLADLEAAVCLCTALKANILGINLNLPVSLSLLLNVCSKNVPRGYQCA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0356 133 Gene3D - 49 133 IPR036312 -
Lele53g0356 133 SMART aai_6 50 132 IPR016140 -
Lele53g0356 133 CDD HPS_like 48 132 IPR027923 -
Lele53g0356 133 FunFam pEARLI1-like lipid transfer protein 1 48 133 - -
Lele53g0356 133 Pfam Hydrophobic seed protein 49 133 IPR027923 -
Lele53g0356 133 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lele53g0356 133 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 132 IPR036312 -
Lele53g0356 133 PANTHER - 5 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0356 Lele-ChrLele53 3135142 3135543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0356 40 132 Acyl Lipid Metabolism Gene Families AT4G22490 37.634 3.33e-16 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0356 53 3135142 3135543 Lele55g1131 55 17781373 17781810 hybridization
Lele53g0356 53 3135142 3135543 Lele56g1079 56 14226654 14227061 hybridization