LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele55g0752	ATGTCTTACCGACACGTGGCGACCACACCTGATTATCCATTTCGCGACACCCAAGATAAGGAAGAGAGAAGAAGAAAAGCAATGGAGACTTTATCTTTGCAAATTGACAAATATCCGAGGGATCTGCTCCGGACATTCATGTCCAGGGATAATCCTCAACAATCTGAAAGCTCGGAGCCTGAAGGTGGTGATTCGGAGGAGATTGAGCTGAATCTTGGACTTTCGCTGGGTGGACGATTTGGTGTTGATAAGCACGCTAAGAAGTTAGGGCGATCATCGTCTATCGTCGGAACAATGCCTCTCGTGAGAGAGAACGAGTCCACAACGCCGCCAACGCCGTCGTATCCAGCTCTTTTGAGGACATCTTCGCTTCCGACGGAGACGGAGGAGGAGTGGAGGAAGAGGAAGGAGTTGCAGATGTTGAGGCGAATGGAGGCGAAGAGAAGACGGTCTGAGAAGCAGAGGAACGCTAGGACGGAGAGAGACGGTGGCGAAGGAAGGACTGAAATGGACGGCCCAAAGGGAAGTGATTGGGCCTTTGGGCTACCCAACTGGGCTGCGGCAGCGTCAAGGCAAGTAGTTCTTAGTGATGTGTTGGCCCAAGGAAAAGCCCATGGGATATTGGGTGGAACTTCTGGTTTTCACGGGGGAAGCTCGTCATCGGGAATGACAGAAATGGAGGGCAAACCATTTCAAGGATCAAGTAATTGTGGTGAAGCAAGAAGCCCTGCTAGTAATCAGATGTTGCAGGAAAGAAGCAATCAGGATGCTGTGGGTTCCTCTGGGACAAAGTCAAATGAGAATATGGTCAAAACACCCAGTGAGGTGGAGAATCCATCAAGAAAACCACATCATGGCCAAAACAGAGGGAGGGAAATTGGGTCAAATTCAGTGGAAGACATGCCTTGTGTTTTTACACAAGGGACTGGCCCTAATGGGAAAAGAATTGAGGGAATATTGTACAGATATGGTAGAGGACAGGAAGTGAGGATTATGTGTGTGTGCCATGGAAACTTTCTCTCTCCAGCAGAGTTTGTGAAGCATGCTGGTGGTGGTGATGTTGCTCACCCACTTAGACGCATAGTGGTAAACCCTTCCTCTACTAACTATGTGTAA	1116	0.4901	MSYRHVATTPDYPFRDTQDKEERRRKAMETLSLQIDKYPRDLLRTFMSRDNPQQSESSEPEGGDSEEIELNLGLSLGGRFGVDKHAKKLGRSSSIVGTMPLVRENESTTPPTPSYPALLRTSSLPTETEEEWRKRKELQMLRRMEAKRRRSEKQRNARTERDGGEGRTEMDGPKGSDWAFGLPNWAAAASRQVVLSDVLAQGKAHGILGGTSGFHGGSSSSGMTEMEGKPFQGSSNCGEARSPASNQMLQERSNQDAVGSSGTKSNENMVKTPSEVENPSRKPHHGQNRGREIGSNSVEDMPCVFTQGTGPNGKRIEGILYRYGRGQEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRRIVVNPSSTNYV	371

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele55g0752	371	Coils	Coil	134	161	-	-
	Lele55g0752	371	MobiDBLite	consensus disorder prediction	144	176	-	-
	Lele55g0752	371	MobiDBLite	consensus disorder prediction	206	299	-	-
	Lele55g0752	371	MobiDBLite	consensus disorder prediction	99	119	-	-
	Lele55g0752	371	MobiDBLite	consensus disorder prediction	144	172	-	-
	Lele55g0752	371	Pfam	Tify domain binding domain	328	363	IPR032308	-
	Lele55g0752	371	MobiDBLite	consensus disorder prediction	213	275	-	-
	Lele55g0752	371	MobiDBLite	consensus disorder prediction	42	70	-	-
	Lele55g0752	371	Pfam	Ethylene-responsive binding factor-associated repression	64	97	IPR012463	-
	Lele55g0752	371	PANTHER	AFP HOMOLOG 2	38	367	IPR031307	GO:0007165
	Lele55g0752	371	MobiDBLite	consensus disorder prediction	1	26	-	-
	Lele55g0752	371	Pfam	Putative nuclear localisation signal	118	227	IPR032310	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele55g0752	Lele-ChrLele55	5021737	5025828	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele53g0739	53	17422776	17426905	Lele55g0752	55	5021737	5025828	hybridization
	Lele54g0735	54	14291006	14293841	Lele55g0752	55	5021737	5025828	hybridization