Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0135 ATGGCCGACGTTCTCTCGGTAATTCCTGCTGCTGTGCTCCGCAACCTTGCTGACAAGCTCTATGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGGGTTGTGAAGCAGCTCGCTGTTGCTGGGGATCATGAAAAAATCACGGCAGTGATCAATTTGTTGATTACGGAATATACTTTCTCGCCCCAAGCAAATCAACGGAAGGGAGGATTGATAGGACTAGCTGCCGCGACAGTTGGGTTGACTAATGAAGCCGCTCAGCATCTTGAGCAAATCGTGCCTCCTGTGTTAAAGTCTTTCTGTGATCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTATACAACATCGCTAAGGTTGTGAGAGGGGAATTCATTGTATTCTTTAACCAGATCTTTGATGCCTTGTGCAAGCTATCCGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTCCTGGATCGGCTTGTGAAGGATATTGTGACTGAAAGCGATCAGTTTAGTATTGAAGAATTTATACCATTATTGAGGGAGCGCATGAATGTCCTGAATCCATATGTTCGTCAGTTTTTGGTTGGATGGATTACTGTGTTGGACAGCGTCCCAGATATTGATATGCTGGGCTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGTTGAGTGATTCTAGCCATGAAATTCGTCAGCAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAGAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATACTGGTTCAGAGGGCAGGATCTCCAGATGAATTTACTAGATTAACAGCTGTCACGTGGATAAATGAGTTTGTCAAGCTCGGTGGAGATCAGCTTGTTCCATATTATGCTGACATACTTGGAGCCATTCTGCCTTGCATATCTGATAAAGAAGAGAAAATTCGAGTGGTTGCTCGTGAAACCAATGAAGAACTACGGGCAATCAGGGCTGATCCAGCAGAAGCATTTGATGTAGGAGCAATCCTGTCTATTGCTAGGAGACAATTGTCAAGTGAATATGAAGCTACTCGAATTGAAGCTCTGCACTGGATATCGACTCTTTTGAACAGATATCGTGCTGAGGTTTTGACATTTCTGGATGACATATTTGACACCTTACTAGAAGCACTTTCGGATCCATCCAATGAGGTTGTGCTTCTGGTTCTTGATGTTCATGCATGCATTGCGATGGATACCCATCACTTTCGACATCTTCTTGTTTACCTAGTGCACAATTTCCAGGCAAATAATTCTCTTTTGGAGAGGCGTGGTGCTTTGATAATCCGTCGGCTTTGTGTGCTTTTGAATGCTGAAAGAGTCTACCGTGAACTATCTACAATACTAGAAGGGGAATCTGATTTGGATTTTGCATCAATTATGGGTCAGGCTTTAAATTTGATCTTACTCACTTCGTCCGAGTTATCTGAGCTTCGAGATCTTTTAAAGCAATCGCTAATAAATCCTGCCGGGAAGGATCTATACGTTTCCTTGTATGCCTCATGGTGCCATTCTCCAATGGCAATTATTAGTCTCTGTTTGTTAGCTCAGACTTATCAACATGCGAGTGCTGTGATTCAATCTCTTGTAGAGGAGGACATTAATGTTAAATTTTTGGTTCAACTGGATAAGTTGGTTCGCTTGATGGAAACTCCAATCTTTGCGTATCTTAGATTGCAGCTTCTTGAACCTGGAAAATATGTATGGTTATTTAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTCAAGATACTGAAAACTCGTTTGAAAGCCGTGCCGTCATATTCTTTCAATTGTGAACGATTGAAGAGAACATCATCTGGGAATCCTTACCAAATTCTTCACCAAATGTCTGGATCTCAAGCTATTGAGGATGGTGATATGATCTTGGATGGTGGGAAGTCACATAATAATGGAATCAATTTTGCTGCAAGGCTGCAACAGTTTGAGAAAATGCAGTACCAGCATCGCATGCATGCTAAAGCACAAGCCCAGTTGCGCAATAATTCCACGTCATTGCCAAAGGAGGGTTCCCAATCACAAAGTCAGGAAGAAGAATCAAGGCGATCTCGCTCATCTGAGCTTAATGCTCCTCCTTTAAGATCATCAAAGAAAGGCTCCGGGCAGCAGCAACTATAA 2187 0.4266 MADVLSVIPAAVLRNLADKLYEKRKNAALEVEGVVKQLAVAGDHEKITAVINLLITEYTFSPQANQRKGGLIGLAAATVGLTNEAAQHLEQIVPPVLKSFCDQDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAVTWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIRADPAEAFDVGAILSIARRQLSSEYEATRIEALHWISTLLNRYRAEVLTFLDDIFDTLLEALSDPSNEVVLLVLDVHACIAMDTHHFRHLLVYLVHNFQANNSLLERRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMGQALNLILLTSSELSELRDLLKQSLINPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASAVIQSLVEEDINVKFLVQLDKLVRLMETPIFAYLRLQLLEPGKYVWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNCERLKRTSSGNPYQILHQMSGSQAIEDGDMILDGGKSHNNGINFAARLQQFEKMQYQHRMHAKAQAQLRNNSTSLPKEGSQSQSQEEESRRSRSSELNAPPLRSSKKGSGQQQL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0135 728 FunFam protein VAC14 homolog 126 248 - -
Lele55g0135 728 FunFam protein VAC14 homolog isoform X1 249 410 - -
Lele55g0135 728 MobiDBLite consensus disorder prediction 709 728 - -
Lele55g0135 728 Gene3D - 7 204 IPR011989 -
Lele55g0135 728 Gene3D - 335 461 IPR011989 -
Lele55g0135 728 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Lele55g0135 728 PANTHER TAX1 BINDING PROTEIN-RELATED 7 688 IPR026825 GO:0006661|GO:0070772
Lele55g0135 728 MobiDBLite consensus disorder prediction 673 728 - -
Lele55g0135 728 SUPERFAMILY ARM repeat 4 542 IPR016024 -
Lele55g0135 728 Gene3D - 205 334 IPR011989 -
Lele55g0135 728 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Lele55g0135 728 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Lele55g0135 728 FunFam ARM repeat superfamily protein 5 125 - -
Lele55g0135 728 MobiDBLite consensus disorder prediction 678 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0135 Lele-ChrLele55 870683 876987 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1342 53 21654271 21660555 Lele55g0135 55 870683 876987 hybridization
Lele54g1318 54 18262736 18269010 Lele55g0135 55 870683 876987 hybridization