Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0124 ATGAACAAAAATTCCCCTCTCTTTCTCTCTTCGTGCTTGGAGCTCTGGTCTCGTGATTGCTCTGGAAATTTTGAAGAGTTGGCATTTAGGATGGGTAGAACAATTGAGCTGTATGGATTCCCCTCTAATGTTTCTGTGTCCACAGTAAAACCATTTGTAGAGAACATTACTGGTGAAGATACTGTCTTTGCTATTAAGATAAGGCAAGGCAAAGGTAAAGTTCCAAGAGCATTTGCTATCATTCAATTCAAAGATGCAAAGAATGCTTCTTACCTTGTCTCCTTGCCGGACAAAAGCATATGGTATGGAAATTCCTATCTTAAGGCTCGAGAACTGGAAAAAGATATTGTGCCAAAGCCAACAAAATTTTTGCATAGCTTGGAGGATGTGAAACTGCATTTTGGATGCCAGATCTCAAAGGAAAGATTCTATATTTTATGGAAAGCAGTTGCTAAGGAAGTAAACTTTGGGATTGGAATGAGAAAGATACAGTTCCTTCTGTCCTATAGACGGTTGGATTATAAGCTTGAGCTTTCCTATGAGAACATTTGGCAGATTGAGATGCATCGTCCACGTGGTGAAACTGCAGAGTATCTTCTGATTCAGCTATACGGTGCTCCTCGAGTATTTGAGAAAGATGTGCACACTTCAGGAAGTATGTTTGAAGATCCTCTTCTCAACTATTGTAAAGATATTTCTGATGATCAATGGTTCCGGGCAATAGATTTCACTCCTTATAGCTCTATTGGGCAGTCTTCTCATATATACTTGCAGCTTCCTTCTCATGGACATCTTCCAAATTTCAAGGAAAACTTTGCTTACTATAAGGAAAGTGAGAGGAAGTTCTCTTTGGAGGAAGGACTCCCTTTTTCTAGCAACTTGAATCTAGTCCCTATAGTTTCTCCTCCTCAAGGAACTTACATACCATTTGACATCCTTTTCAAAGTTAACGCATTGCTTCAGCAGGGGTGTCTTGCAGGTCCAGCACTAGATGATGGCTTTTATCGCTTGATTGATCCAAGTAGAATGGACCGTGCTTTCATTGAACATGCTTTAGAGAAAATGTATTATTCAAAGGAACTCTGCGATGAACCCTCAAAGTGGCTGACGGATCAGTTCAGAAAGTATCTTGCATCAAAGAATCCATCCCGGTCACCTTCCATATCCTTAGATAATGGCTTGGTGTATGTTCGCAGGGTTCAGATTACCCCTTGTAAAGTGTATTTCTGTGGCCCAGAGGTTAATGTCTCAAATCGTGTCCTCCGCCATTTCCATGAGTTCATTGATAACTTCCTACGTGTTTCATTTGTTGACGAGGAGTTGGATAAAATGTTTTCAACAGATTTATCTCCACGAACCTCTTCTAGCGAGCAAAGAAAAACTGAGATCTATACAAGAATTCTTTCCATTCTTAGAGATGGCATAGTAATAGGTGATAAAAAGTTTGAATTTCTAGCATTCTCATCAAGTCAATTGCGGGAGAATTCTTTATGGATGTTTGCTCGTACAAGATGTGGACTTAATGCTGCTGACATTAGAGAGTGGATGGGGAAGTTTCGCAACATTAGAAATGTCGCTAAATATGCTGCTAGACTGGGCCAATCTTTTGGTTCATCTACTGAAACTTTAAGTGTTAGCCGGGATGAAACTGAGATGATTCCTGATGTGGTGGTTAAACGTGATGGAATTGACTATGTTTTCTCTGATGGGATTGGGAAGATTTCTGCTAACTTTGCCAGGAAAGTGGCTATAAAATATGGCCATAAATCATCCACTCCATCTGCCTTTCAGATTCGATATGGTGGGTACAAAGGGGTTGTGGCTGTTGACCCAACATCATCAGTGAAATTATCTCTGAGGAGGAGCATGCTCAAGTATGAATCAGATAATACAAAACTAGATGTCTTGGCATGTAGTAAATTTCAGCCTTGTTATCTGAATCGGCAGATAATAACGCTCTTATCTACTCTCGGTGTCAAGGATCATGTTTTTGAGAAAAAACAGAAGGAAGCTATAAACCAACTGAACTCATTACTAACAGATTCATTAAAGGCACAGGAGGCTCTGGACTTGATGTCTCCTGGGGAGATAGCTAATATTCTGAAGGAGATTCTCATCTGCGGTTATAAGCCTGATGCAGAACCTTTTCTTTCAATGATGCTGCAAACATTCAGGGCATCAAAACTTTTGGAATTGCGACGCAAAACTAGAATTTTGGTTCCAAATGGAAGAGCGATGATGGGATGTCTAGATGAAACAAGAACCTTGGAATATGGTCAAGTATTTGTGCATTATTCTGATAGCAGGTTCACGCCATTGTCTGATGATTCTGCTGTGTATGGCTCTGAGAGATCTTATATAGTTACAGGTAACGTAGTTGTTGCAAAAAACCCATGCTTGCATCCAGGTGATGTACGTGTTTTGAAGGCTGTTAATGTGCCAGCTCTTCATCACATGGTCGATTGTGTTGTTTTCCCTCAAAAAGGATCCAGACCCCATCCCGATGAGTGTTCGGGAAGTGATCTAGATGGAGACATCTATTTTGTTTGTTGGGACCCAGAATTGATTCCACGTCGCCAAATATTGCCAATGGATTATACTCCAGCTCAAACTATACAATTGGATCATGATGTCATGATAGAGGAAGTTGAGGAATACTTTGCCAACTATATAGTCAATGACAGTCTAGGAATAATTGCAAATGCCCACACTGTCTTCGCAGATAGAGAGCCCGATAAGGCAATGGCTAAACCATGCATTGAGCTTGCAAAGCTATTTTCGATTGCCGTTGACTTTCCGAAAACCGGTGTCCCGGCTGTTATACCTCGTGAACTATATGTCAAAGAATATCCAGACTTCATGGAGAAACCCGATAAACCCACCTATGAATCAATGAATGTGATCGGAAAGCTTTTTAGGGAAGTGAAAGAAATTGCACCAGAAGCTACCTCTACTCCAGCCTTCACTCGGCAAATGGCTGAGAAGTCGTATGACTCCGATATGGAAGTCGAAGGCTTTATGGATTATGTTGATGATGCTTTCTATCACAAAAGCAACTATGACTTCAAGTTGGGGAATTTGATGGATTACTATGGCATCAAGACCGAGGCCGAAATCCTGAGTGGGAATATTATGAGAATGTCCAAATCTTTTACCAAAAGAAGGGATGCAGAAGCAATTACAATGGCTGTGAGATCCCTAAGAAAAGAAGCTAGGACCTGGTTCAACAGCCGTGGAAGTGCACGAGATTCTGAGCTGGACGATCCGATGGCAAAAGCATCTGCTTGGTACCATGTAACTTATCATCCAAGTTTTTGGGGCTGCTACAATGAAGGTATGAACAGGGATCATTTTCTAAGCTTCGCATGGTGTGTTTACGATAAGCTTGTCACAATCAAGCGGGACAAAGTCAGCATTAGAAGGTCTCTCCAACTATCTTCCTTGGAACGCAAGTTTAGCAGTGGGCTGCATTTGTATTGA 3480 0.4106 MNKNSPLFLSSCLELWSRDCSGNFEELAFRMGRTIELYGFPSNVSVSTVKPFVENITGEDTVFAIKIRQGKGKVPRAFAIIQFKDAKNASYLVSLPDKSIWYGNSYLKARELEKDIVPKPTKFLHSLEDVKLHFGCQISKERFYILWKAVAKEVNFGIGMRKIQFLLSYRRLDYKLELSYENIWQIEMHRPRGETAEYLLIQLYGAPRVFEKDVHTSGSMFEDPLLNYCKDISDDQWFRAIDFTPYSSIGQSSHIYLQLPSHGHLPNFKENFAYYKESERKFSLEEGLPFSSNLNLVPIVSPPQGTYIPFDILFKVNALLQQGCLAGPALDDGFYRLIDPSRMDRAFIEHALEKMYYSKELCDEPSKWLTDQFRKYLASKNPSRSPSISLDNGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFHEFIDNFLRVSFVDEELDKMFSTDLSPRTSSSEQRKTEIYTRILSILRDGIVIGDKKFEFLAFSSSQLRENSLWMFARTRCGLNAADIREWMGKFRNIRNVAKYAARLGQSFGSSTETLSVSRDETEMIPDVVVKRDGIDYVFSDGIGKISANFARKVAIKYGHKSSTPSAFQIRYGGYKGVVAVDPTSSVKLSLRRSMLKYESDNTKLDVLACSKFQPCYLNRQIITLLSTLGVKDHVFEKKQKEAINQLNSLLTDSLKAQEALDLMSPGEIANILKEILICGYKPDAEPFLSMMLQTFRASKLLELRRKTRILVPNGRAMMGCLDETRTLEYGQVFVHYSDSRFTPLSDDSAVYGSERSYIVTGNVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGSRPHPDECSGSDLDGDIYFVCWDPELIPRRQILPMDYTPAQTIQLDHDVMIEEVEEYFANYIVNDSLGIIANAHTVFADREPDKAMAKPCIELAKLFSIAVDFPKTGVPAVIPRELYVKEYPDFMEKPDKPTYESMNVIGKLFREVKEIAPEATSTPAFTRQMAEKSYDSDMEVEGFMDYVDDAFYHKSNYDFKLGNLMDYYGIKTEAEILSGNIMRMSKSFTKRRDAEAITMAVRSLRKEARTWFNSRGSARDSELDDPMAKASAWYHVTYHPSFWGCYNEGMNRDHFLSFAWCVYDKLVTIKRDKVSIRRSLQLSSLERKFSSGLHLY 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0124 1159 PANTHER RNA-DEPENDENT RNA POLYMERASE 33 1136 IPR007855 GO:0003968
Lele55g0124 1159 Pfam RNA dependent RNA polymerase 402 975 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0124 Lele-ChrLele55 804090 811156 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1353 53 21723886 21731951 Lele55g0124 55 804090 811156 hybridization
Lele54g1327 54 18330299 18338180 Lele55g0124 55 804090 811156 hybridization