Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0098 ATGGCAATGCCATCGGGAAATGTGGTAATTCCGGACAAAATGCAGTTTTCAAGCGGTGGCGGTGGCGGGGCTGGCAGTGGAGCTAGTGACATTCACCAGCATCCCTACCGCCAACAATGGATTGTCGATGAGCGGGATGGATTTATCAATTGGCTGCGCAGCGAATTCGCTGCTGCAAACGCAATTATAGACTCTCTTTGTCACCATTTACGGGCAATTGGTGACCCGGGTGAGTATGACATGGTCATTGGGACCATTCAGCAAAGGCGGTGCAATTGGAATCAGGTGCTTCTTATGCAGCAATACTTTTCGGTGGCGGATGTGGCGTATGCACTCCAGCAAGTAGCATGGAGGAGGCAACAGAGATATCTGGATCCAGTGAAAGTGGGTGCAAAGGAATACAAGAAATCTGGTTCTGGTTATAATAAGCAACATGGGCAGAGGTTTGAGGCAGCAAAGGAAGGGCATAATTCCAATGTGGAATCTTTCAGTCACGAAGGCAATTCTCTTGTTACTGAAGGCTCTGGAAAAGGGGCGCCGCTAACTGACAAACAAGAAGAACATAAATCAGGTGGCAAGTCTGGAAAGATGGATGATAAGGGTTTAGCGTCTTCTGAGGAAAAAAAAGATGCTATACCAAAGCTTCAAAATGATGGAAGCTTGAAAAGTTCAGGGCATTCCACGGGATCTCTGTCTAACTCAGAATCTGAAGCTGTGGTTGTAAATGACGGAATCATATCAGATTCTAAAGAGGATGACTCGCATGTTACGCAAAATCATCATCACAACCAAGTGAAAACTTTTGTTGGGAATGAGATGTTTGATGGGAAGACGGTGAATGTGGTTGATGGACTGAAATTATATGAAGATTGTTGCGATGGAAATGAAGTCTCAAAACTTGTTTCACTGGTAAATGAACTGAGGGCTGCCGGAAAAAGAGGACAGTATCAAGGAACACAGACGTATGTGGTTTCAAAAAGGCCTATGAAAGGTCGTGGAAGGGAGATGATTCAGTTGGGTGTCCCTATTGCTGATGCACCACCAGATGGGGAAAATCTGACAGGGACCTCCAAAGATAAAAAAGTAGAATCTATCCCTGCCTTGTTTCAAGATATTGTTGAGCGCTTGTTAGCCTCGCAAGTTATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTTTACAATGAGGGTGATCACTCGCAGCCTTACAATTGGCCGCCTTGGTTTGGAAGGCCTGTTTACGTGCTTTTCCTGACAGAATGTGACATGACATTTGGGAGAATTATTGCCTCAGATCATCCGGGGGATTATAGAGGCACTTTCAAGCTTTCTCTTGTGCCTGGGTCCCTTCTGGCAATTCAAGGAAAATCTGCTGATTTTGCTCGACATGCTCTTCCTTCTATTCGCAAACAACGCATACTTGTTACTTTCACCAAGTCCCAACCAAAAAAATCATGGCCTAGTGATGCTCAGCGACTTGCTTCATCAGCAGCATCCTCTCATTGGGGCCCACCACCCAGCAGATCTCCCAATCATATACGTCATCATTTAGGCCCCAAGCATTATGCGCCAGCTCCAACGACAGGGGTATTGCCAGCCCCACCCATTCGTTCACAAATTCCACCTCCGAATGGCATACAACCACTGTTTGTGCCTGCGCCAGTTGCACCTCCCATGCCATTTCCTGCACCAGTTCCTATCCCACCGGGTTCTACTGGATGGACAGCAGCTCCTCCTAGGCATCCTCCTCCCCGAATTCCTGTTCCTGGCACTGGAGTCTTCCTTCCTCCACCAGGCTCGGGCAATTCGTCTCAAGCATTATTGGCTACCTTGACTGAGATGAACTCTAGTGTAGAGAATGCCACCCTACCAGAGAAAGAAAACGGCAAGTCTAATCATAACAATGCGAGTGCTTCCCCAACAGCAACAGTGGATGGACAGATGCAGAGGCAAGAATGCAGTGAAAATGGGACTGTGGGTGAAACTGAAGGTGAGCAGGCTGTTAAGCAGGAAAGCAACGACAAAGTTATGGTAAACCATTAG 2043 0.4699 MAMPSGNVVIPDKMQFSSGGGGGAGSGASDIHQHPYRQQWIVDERDGFINWLRSEFAAANAIIDSLCHHLRAIGDPGEYDMVIGTIQQRRCNWNQVLLMQQYFSVADVAYALQQVAWRRQQRYLDPVKVGAKEYKKSGSGYNKQHGQRFEAAKEGHNSNVESFSHEGNSLVTEGSGKGAPLTDKQEEHKSGGKSGKMDDKGLASSEEKKDAIPKLQNDGSLKSSGHSTGSLSNSESEAVVVNDGIISDSKEDDSHVTQNHHHNQVKTFVGNEMFDGKTVNVVDGLKLYEDCCDGNEVSKLVSLVNELRAAGKRGQYQGTQTYVVSKRPMKGRGREMIQLGVPIADAPPDGENLTGTSKDKKVESIPALFQDIVERLLASQVMTVKPDACIVDFYNEGDHSQPYNWPPWFGRPVYVLFLTECDMTFGRIIASDHPGDYRGTFKLSLVPGSLLAIQGKSADFARHALPSIRKQRILVTFTKSQPKKSWPSDAQRLASSAASSHWGPPPSRSPNHIRHHLGPKHYAPAPTTGVLPAPPIRSQIPPPNGIQPLFVPAPVAPPMPFPAPVPIPPGSTGWTAAPPRHPPPRIPVPGTGVFLPPPGSGNSSQALLATLTEMNSSVENATLPEKENGKSNHNNASASPTATVDGQMQRQECSENGTVGETEGEQAVKQESNDKVMVNH 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0098 680 MobiDBLite consensus disorder prediction 157 171 - -
Lele55g0098 680 MobiDBLite consensus disorder prediction 217 238 - -
Lele55g0098 680 MobiDBLite consensus disorder prediction 623 680 - -
Lele55g0098 680 SUPERFAMILY Clavaminate synthase-like 275 477 - -
Lele55g0098 680 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 39 638 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele55g0098 680 MobiDBLite consensus disorder prediction 479 506 - -
Lele55g0098 680 MobiDBLite consensus disorder prediction 479 543 - -
Lele55g0098 680 MobiDBLite consensus disorder prediction 180 215 - -
Lele55g0098 680 Gene3D - 269 485 IPR037151 -
Lele55g0098 680 MobiDBLite consensus disorder prediction 528 543 - -
Lele55g0098 680 MobiDBLite consensus disorder prediction 135 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0098 Lele-ChrLele55 606451 611572 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1377 53 21919990 21925034 Lele55g0098 55 606451 611572 hybridization
Lele54g1353 54 18547467 18552512 Lele55g0098 55 606451 611572 hybridization