Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1353 ATGGCAATGCCATCGGGAAATGTGGTAATTCCGGACAAAATGCTGTTTCCAAGCGGTGGCGGTGGTGGGGCTGGCAATGGAGGCAGTGAGATTCACCAGCATCCCTACCGCCAACAATGGTTTGTCGATGAGCGGGATGGGTTTATCAATTGGCTGCGCAGCGAATTCGCGGCTGCAAATGCAATTATAGACTCTCTTTGTCACCATTTACGGGCAATTGGTGACCCTGGTGAGTATGACATGGTCATTGGCACCATTCAGCAAAGGCGGTGCAATTGGAATCAGGTGCTTCTTATGCAGCAATACTTTTCGGTGGCGGACGTGGTATATGTACTCCAGCAAGTAGCATGGAGGAGACAACAGAGATATCAGGATCCAGTGAAAGTGGGTGCAAAGGAATACAAGAAATCTGGTTATAATAAGCAACAAGGGCAGAGATTTGAGGCAGCAAAGGAAGGGCATAATTCCAATGTGGAATCTTTCAGTCACGAAGGCAATGCTATAGTTACTGAAGGCTCTGACAAAGGGGCGCCGCTAACTGACAAAAAAGAAGAAAATAAATCAGGTGGCAAGTCTGGAAAGATGGATGGTAAGAGTTTAGCGTCTTCTGAGGAAAAAAAAGATGCTATAACAAAGCTTCAAAATGATGGAAGCTTGAAAAGCTCAGGGCATTCCACGGGATCTCTGTCTAACTCAGAATCTGAAGCTGTGGTTGTAAATGACGGAATTATATCAGATTCTAAAGAGGATGACTGGCATGTTACGCAAAATCATCATCAGAACCAAGCAAAGACTTTTGTTGGCAATGAGATGTTTGATGGGAAGACGGTGAATGTGGTTGATGGACTGAAATTATATGAAGATTTGTGCGATGGAAATGAAGTCTCAAAACTTGTTTCACTGGTAAATGAACTGAGGGCTGCTGGAAAAAGAGGACAATATCAAGGATCACAGACATATGTGGTTTCAAAAAGGCCTATGAAAGGTCGTGGAAGGGAGATGATTCAGTTGGATAAAAAAGTAGAATCTATCCCTGCCTCGTTTCAAGATATTATTGAGCGCTTGGTAGCCTCACAAGTTATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTTTACAATGAGGGTGATCACTCGCAGCCTTACAATTGGCCGCCTTGGTTTGGAAGGCCTGTTTACGTGCTTTTCCTGACAGAATGTGACATGACATTTGGGAGAGTTATTGCCTCAGATCATCCGGGGGATTATAGAGGCACTTTCAAGCTTTCTCTTGTACCTGGGTCCCTTCTGGCAATTCAAGGAAAATCTGCTGAGTTTGCTCGACATGCCCTTCCCTCCATTCGCAAACAACGCATACTTGTTACTTTCACCAAGTCCCAACCAAAAAAATCATTGCCTAGTGATGGTCAGCGTCTTGCTTCATCAGCAGCTTCCTCACATTGGGGTCCACCACCCAGCAGATCTCCCAATCATATACGTCATCATTTAGGACCCAAGCATTATGCGCCAGCTCCAACGACAGGAGTACTGCCAGCCCCACCCATTCGTACACAAATTCCTCCTCCGAATGGCATACAGCCATTGTTTGTGCCTGCCCCAGTTGCACCTCCCATGCCATTTCCTGCACCAGTTCCTATCCCACCGGGTTCTACTGGATGGACAGCAGCTCCTCCAAGGCATCCTTCTCCCCGAATTTCTGTTCCTGGCACTGGGGTCTTCCTTCCTCCACCAGGCTCGGGCAATTCGTCTCAAGCATTATCGGCTACTTTGACTGAGATGAACTCTAGTGCAGAGAATGCAACCACCCTACCAGAAAAAGAAAACGGCAAGTATAATCATAACAATGCGAGTGCTGCCCCAACAGCAACGGTGGATGGACAGACGCAGATGCAAGAATGCAATGAAAATGGGACTGTGGGTGAAACTGAAGGTGAGGAGGCTGTGGAGAAAGAGCAGGAAAGCAACGACAAAGTTGTGGTAAGCCATTAG 1989 0.4651 MAMPSGNVVIPDKMLFPSGGGGGAGNGGSEIHQHPYRQQWFVDERDGFINWLRSEFAAANAIIDSLCHHLRAIGDPGEYDMVIGTIQQRRCNWNQVLLMQQYFSVADVVYVLQQVAWRRQQRYQDPVKVGAKEYKKSGYNKQQGQRFEAAKEGHNSNVESFSHEGNAIVTEGSDKGAPLTDKKEENKSGGKSGKMDGKSLASSEEKKDAITKLQNDGSLKSSGHSTGSLSNSESEAVVVNDGIISDSKEDDWHVTQNHHQNQAKTFVGNEMFDGKTVNVVDGLKLYEDLCDGNEVSKLVSLVNELRAAGKRGQYQGSQTYVVSKRPMKGRGREMIQLDKKVESIPASFQDIIERLVASQVMTVKPDACIVDFYNEGDHSQPYNWPPWFGRPVYVLFLTECDMTFGRVIASDHPGDYRGTFKLSLVPGSLLAIQGKSAEFARHALPSIRKQRILVTFTKSQPKKSLPSDGQRLASSAASSHWGPPPSRSPNHIRHHLGPKHYAPAPTTGVLPAPPIRTQIPPPNGIQPLFVPAPVAPPMPFPAPVPIPPGSTGWTAAPPRHPSPRISVPGTGVFLPPPGSGNSSQALSATLTEMNSSAENATTLPEKENGKYNHNNASAAPTATVDGQTQMQECNENGTVGETEGEEAVEKEQESNDKVVVSH 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1353 662 MobiDBLite consensus disorder prediction 507 521 - -
Lele54g1353 662 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 39 618 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele54g1353 662 MobiDBLite consensus disorder prediction 458 485 - -
Lele54g1353 662 MobiDBLite consensus disorder prediction 592 662 - -
Lele54g1353 662 MobiDBLite consensus disorder prediction 214 234 - -
Lele54g1353 662 MobiDBLite consensus disorder prediction 137 234 - -
Lele54g1353 662 SUPERFAMILY Clavaminate synthase-like 272 456 - -
Lele54g1353 662 Gene3D - 267 465 IPR037151 -
Lele54g1353 662 MobiDBLite consensus disorder prediction 176 213 - -
Lele54g1353 662 MobiDBLite consensus disorder prediction 458 521 - -
Lele54g1353 662 MobiDBLite consensus disorder prediction 592 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1353 Lele-ChrLele54 18547467 18552512 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1353 54 18547467 18552512 Lele55g0098 55 606451 611572 hybridization
Lele54g1353 54 18547467 18552512 Lele56g0099 56 1046575 1051611 hybridization