Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1377 ATGGCAATGCCATCGGGAAATGTGGTAATTCCGGACAAAATGCAGTTTTCAAGCGGTGGCGGTGGCGGTGGCGGGGCTGGCAGTGGAACCAGTGACATTCACCAGCATCCCTACCGCCAACAATGGATTGTCGATGAGCGGGATGGATTTATCAATTGGCTGCGCAGCGAATTCGCTGCTGCAAACGCAATTATAGACTCTCTTTGTCACCATTTACGGGCAATTGGTGACCCGGGTGAGTATGACATGGTCATTGGGACTATTCACCAAAGGCGGTGCAATTGGAATCAGGTGCTTCTTATGCAGCAATACTTTTCGGTGGCGGATGTGGCGTATGCACTCCAGCAAGTAGCATGGAGGAGGCAACAGAGATATCTGGATCCAGTGAAAGTGGGTGCAAAGGAATACAAGAAATCTGGTTCAGGTTATAATAAGCAACATGGGCAGAGGTTTGAGGCAGCAAAGGAAGGGCATAATTCCAATGTGGAATCTTTCAGTCGCGAGGGCAATTCTCTTCTTACTGAAGGCTCTGACAAAGGGGCGCCGCTAACTGACAAACAAGAAGAACATAAATCAGGTGGCAAGTCTGGAAAGATGGATGATAAGGGTTTAGCGTCTTCTGAGGAAAAAAAAGATGCTATTCCAAATCTTCAAAATGATGGAAGCTTGAAAAGCTCAGGGCATTCCACGGGATCTCTGTCTAACTCAGAATCTGAAGCTGTGGTTGTAAATGACGGAATTATATCATATTCTAAAGAGGATAACACGCATATTACGCAAAATCGTCATCAGAACCAAGTGAAGACTTTTGTTGGGAATGAGATGTTTGATGGGAAGACGGTGAATGTGGTTGAAGGACTGAAATTATATGAAGATTGTTGCGATGGAAATGAAGTCTCAAAACTTGTTTCACTGGTAAATGAACTGAGGGCTGCTGGAAAAAGAGGACGATATCAAGGAACACAGACATATGTGGTTTCAAAAAGGCCTATGAAAGGTCGTGGAAGGGAGATGATTCAGTTGGGTGTCCCTATTGCTGATGCACCACCAGATGGGGAAAATCTGACAGGGACCTCCAAAGATAAAAAAGTAGAATCTATCCCTGCCTTGTTTCAAGATATTATTGAGCGCTTGTTAGCCTCGCAAGTTATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTTTACAATGAGGGTGATCACTCGCAGCCTTACAATTGGCCGCCTTGGTTTGGAAGGCCTGTTTACGTGCTTTTCCTGACAGAATGTGACATGACATTTGGGAGAGTTATTTTGTCAGATCATCCGGGGGATTATAGAGGCACTTTCAAGCTTTCTCTTGTGCCTGGGTCCCTTCTGGCAATTCAAGGAAAATCTGCTGATTTTGCTCGACATGCTCTCCCCTCTATTCGCAAACAACGCATACTTGTTACTTTCACCAAGTCCCAACCAAAAAAATCATTGCCTAGTGATGCTCAGCGACTTGCTTCATCAACAGCATCCTCTCATTGGGGCCCACCACCCAGCAGATCTCCCAATCATATACGTCATCATTTAGGCCCCAAGCATTATGTGCCAGCTCCCACGACAGGAGTATTGCCAGCCCCACCCGTTCGTTCACAAATTACACCTCCGAATGGCATACAACCACTGTTTGTGCCTGCGCCAGTTGCACCTCCCATGCCATTTCCTGCACCAGTTCCTATCCCTCCGGTTTCTGCTGGATGGACAGCAGCTCCTCCTAGGCATCCTGCTCCTCGAATTCCTGTTCCTGGTACTGGAGTCTTCCTTCCTCCACCAGGCTCGGGCAAGTCGTCTCAAGCATTATCGCCGGCTACCTTGACTGAGATGAACTCTAGCGTAGAGAATGCAACTCTACCAGAGAAAGAAAACGGCAAGTCTAATTATAACAATGCGAGTGCTTCCCCAACGGCAACAGTGGATGGACAGATGCAGAGGCAAGAATGCAGTGAAAATGGGACTGTGGGTGAAACTGAAGGTGAGCAGGCTGTTGAGAAAGAGCAGGAAAGCAATGACAAAGTTATGGTAAGCCATTAG 2058 0.4684 MAMPSGNVVIPDKMQFSSGGGGGGGAGSGTSDIHQHPYRQQWIVDERDGFINWLRSEFAAANAIIDSLCHHLRAIGDPGEYDMVIGTIHQRRCNWNQVLLMQQYFSVADVAYALQQVAWRRQQRYLDPVKVGAKEYKKSGSGYNKQHGQRFEAAKEGHNSNVESFSREGNSLLTEGSDKGAPLTDKQEEHKSGGKSGKMDDKGLASSEEKKDAIPNLQNDGSLKSSGHSTGSLSNSESEAVVVNDGIISYSKEDNTHITQNRHQNQVKTFVGNEMFDGKTVNVVEGLKLYEDCCDGNEVSKLVSLVNELRAAGKRGRYQGTQTYVVSKRPMKGRGREMIQLGVPIADAPPDGENLTGTSKDKKVESIPALFQDIIERLLASQVMTVKPDACIVDFYNEGDHSQPYNWPPWFGRPVYVLFLTECDMTFGRVILSDHPGDYRGTFKLSLVPGSLLAIQGKSADFARHALPSIRKQRILVTFTKSQPKKSLPSDAQRLASSTASSHWGPPPSRSPNHIRHHLGPKHYVPAPTTGVLPAPPVRSQITPPNGIQPLFVPAPVAPPMPFPAPVPIPPVSAGWTAAPPRHPAPRIPVPGTGVFLPPPGSGKSSQALSPATLTEMNSSVENATLPEKENGKSNYNNASASPTATVDGQMQRQECSENGTVGETEGEQAVEKEQESNDKVMVSH 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1377 685 MobiDBLite consensus disorder prediction 591 612 - -
Lele53g1377 685 SUPERFAMILY Clavaminate synthase-like 277 479 - -
Lele53g1377 685 MobiDBLite consensus disorder prediction 626 664 - -
Lele53g1377 685 Gene3D - 271 488 IPR037151 -
Lele53g1377 685 MobiDBLite consensus disorder prediction 667 685 - -
Lele53g1377 685 MobiDBLite consensus disorder prediction 218 238 - -
Lele53g1377 685 MobiDBLite consensus disorder prediction 181 215 - -
Lele53g1377 685 MobiDBLite consensus disorder prediction 159 173 - -
Lele53g1377 685 MobiDBLite consensus disorder prediction 137 238 - -
Lele53g1377 685 MobiDBLite consensus disorder prediction 626 685 - -
Lele53g1377 685 MobiDBLite consensus disorder prediction 481 508 - -
Lele53g1377 685 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 41 640 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lele53g1377 685 MobiDBLite consensus disorder prediction 481 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1377 Lele-ChrLele53 21919990 21925034 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1377 53 21919990 21925034 Lele55g0098 55 606451 611572 hybridization
Lele53g1377 53 21919990 21925034 Lele56g0099 56 1046575 1051611 hybridization