Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0081 ATGAGCCTCTGGCAGAGACTCGCCGGAGCTCTGAAAGACACGAACAGCGTGTGGGTGGCTCAGCTGTCTCGTCGCACCTCCTTCCGCAACCCCGATCTGGAAGCCGCCGTCATCAAAGCCACCAGCCACGATCAACATCGCATCGATTGCAAGAACGTTCAGCGCGTCTTCCAATGGGTTCGCACCTCTCCTCTATACCTCAAGCCCCTCGTCTGGGCTCTCGCCATGCGAATGCAGAAGACTCGAAGCTGGGTCGTCGCTACCAAGGGCCTAATGCTCATGCACGGCATTTATTGCTGTGATCTTGCCATCATTCGAAAGATGGGTCGATTGCCCTTCGATCTCGCCAATTTCAGCGACGATCATGTCAAGCCCGATAAGGCTTGGGCTTACAACGCGTTCGTTCGTTCGTATTTTGCGTATTTGGACCAGAAATCCGCCTTTTCGTCCATGGAATTTAGAAAACAGAGGAAACGGGGCAAGAAAACAGAGGACACGTTGATGGAAGAATTGGAGAAATTGCAGGCGATGCAGGATTTGATTGACATGCTGCTTCAGATTAAACCTGAGCATTTGACTTCGCATAAAGGTCTTATCCTGGAAGCCATGGATTGCATTATCGTGGAGCTTTTCGACGTGCATGGTAAATTCTGCAAAGGGATTGCTCGAGCTCTCTTGAGGATATATGACATTGGCGGGAAGATGGAGGCTAGTGTTGGGCTCAAGGTTCTTGAGAAAGCAGCAATCCAGAGCTGTCAGCTTTCTATATACTTCGAGTTCTGTAGGGAAATCGGCGTCCTCAACGCTTCTCAATGCCCCAAAATGGAGCGATTCCCCAAAGGGTATATGAAAGATCTGGAGAGAATCATCAATGGGGCTGATGAGAAGAAGGAAAACTTGAAGGGTGATAATGATGAAGATAAGGGCATGCTGTCGTATGTTAATGCCATTGCCTGCAAGGATGAACACAAGGGATCAGATGGCATGAAGACGATATTTACAGAAAACTGGGTGGTCTTTGATGATGAAATGGTGCTCGATGTTGATAGGGCCAAAGCTACTTTCTCAACCAACCCTTTTGAAGAACCATATTGCATCGTTCCATACCAAGCAGTACATAACCAAGTTCTTCCGGATTTAATTAGTTTTTAG 1152 0.48 MSLWQRLAGALKDTNSVWVAQLSRRTSFRNPDLEAAVIKATSHDQHRIDCKNVQRVFQWVRTSPLYLKPLVWALAMRMQKTRSWVVATKGLMLMHGIYCCDLAIIRKMGRLPFDLANFSDDHVKPDKAWAYNAFVRSYFAYLDQKSAFSSMEFRKQRKRGKKTEDTLMEELEKLQAMQDLIDMLLQIKPEHLTSHKGLILEAMDCIIVELFDVHGKFCKGIARALLRIYDIGGKMEASVGLKVLEKAAIQSCQLSIYFEFCREIGVLNASQCPKMERFPKGYMKDLERIINGADEKKENLKGDNDEDKGMLSYVNAIACKDEHKGSDGMKTIFTENWVVFDDEMVLDVDRAKATFSTNPFEEPYCIVPYQAVHNQVLPDLISF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0081 383 FunFam Putative clathrin assembly protein 7 153 - -
Lele55g0081 383 SUPERFAMILY GAT-like domain 169 292 - -
Lele55g0081 383 Coils Coil 283 303 - -
Lele55g0081 383 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 302 IPR045192 GO:0048268|GO:0072583
Lele55g0081 383 SMART enth_2 31 157 IPR013809 -
Lele55g0081 383 Gene3D - 9 154 IPR008942 -
Lele55g0081 383 CDD ANTH_N_AP180_plant 33 149 - -
Lele55g0081 383 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Lele55g0081 383 Gene3D ANTH domain 155 304 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele55g0081 383 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Lele55g0081 383 Pfam ANTH domain 32 290 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0081 Lele-ChrLele55 517675 518826 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1389 53 21995353 21996479 Lele55g0081 55 517675 518826 hybridization
Lele54g1370 54 18635087 18636040 Lele55g0081 55 517675 518826 hybridization