Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1352 ATGGCTTATTCCGCACGCATGCGTATGGTCTTAAATGGTGGCCGTAAACTCCCTCTTTCTCTCTCTTCCCCTGGCCCTGCCCCTGCCCTCACTCTCTCATTTGTTGTTCTCTATCTGGATCAGTGTAATCTAGCGGTATTGTTGAATCTTCCCACTATGGCAACGACTCCGCTCTCCCAGGCTTCCGTCCTTCAACCCAATCGTCCTCTGAATCTCAGAGCTCAACAGTTTCCTCGCGTGGCTCAGGATCTCCGAATCAAGCCTACTCCCTCAAATGTTCGGTATTTGGCCAAAATGGAGAATGGGTTCGTCCCAAAAGCCTCGGCGGCTGTCTTGACATCGAATTCTAACTCTGCAGTCCCAGTCACAGCGGCCACTAGTCCCATTGTTGTCATTGACAACTACGACAGTTTTACCTATAATCTTTGCCAGTACATGGGAGAGCTGGGATTTCACTTTGAGGTGTACCGCAATGATGAGTTAACAATTGAGGAGTTAAAGAGGAAAAATCCTAGAGGTGTGCTAATATCACCTGGTCCTGGTGCACCTCAAGATTCTGGCATATCTTTGCAGACAGTTTTGGAACTTGGACCAACTGTACCTTTGTTTGGTGTGTGCATGGGCCTCCAATGTATTGGAGAGGCTTTTGGAGGAAAGATTGTGCGTTCTCCTCTAGGTGTCATGCATGGAAAAAGCTCTTTGGTATATTATGACGAGAAGGGAGAAGACGGAGTATTGTCTGGGTTATCAAACCCTTTCACTGCTGGTAGATATCATAGCCTTGTGATTGAAAAAGAGAGCTTTCCTCATGAAGAACTTGAGGTAACAGCCTGGACAGAGGATGGCCTTGTAATGGCTGCCCGTCATAAGAGATATAAGCATCTGCAGGGGGTTCAATTTCATCCAGAGAGCATCATAACCACCGAAGGAAAGACGATTGTCCGCAATTTTGTCAAGCTTATAGAGAAAAGGGAGGCTGAGGCTTTATCAAAATAA 996 0.4669 MAYSARMRMVLNGGRKLPLSLSSPGPAPALTLSFVVLYLDQCNLAVLLNLPTMATTPLSQASVLQPNRPLNLRAQQFPRVAQDLRIKPTPSNVRYLAKMENGFVPKASAAVLTSNSNSAVPVTAATSPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTIEELKRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGVLSGLSNPFTAGRYHSLVIEKESFPHEELEVTAWTEDGLVMAARHKRYKHLQGVQFHPESIITTEGKTIVRNFVKLIEKREAEALSK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1352 331 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 201 217 - -
Lele54g1352 331 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 171 185 - -
Lele54g1352 331 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 118 325 - -
Lele54g1352 331 CDD GATase1_Anthranilate_Synthase 129 318 IPR006221 -
Lele54g1352 331 Gene3D - 127 320 IPR029062 -
Lele54g1352 331 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 129 319 IPR006221 -
Lele54g1352 331 FunFam Anthranilate synthase beta subunit 1 127 320 - -
Lele54g1352 331 SUPERFAMILY Class I glutamine amidotransferase-like 128 323 IPR029062 -
Lele54g1352 331 Pfam Glutamine amidotransferase class-I 130 318 IPR017926 -
Lele54g1352 331 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 128 327 - -
Lele54g1352 331 PRINTS Glutamine amidotransferase superfamily signature 201 212 - -
Lele54g1352 331 PRINTS Glutamine amidotransferase superfamily signature 174 183 - -
Lele54g1352 331 PRINTS Glutamine amidotransferase superfamily signature 297 310 - -
Lele54g1352 331 PRINTS Anthranilate synthase component II signature 250 262 - -
Lele54g1352 331 PRINTS Anthranilate synthase component II signature 201 212 - -
Lele54g1352 331 PRINTS Anthranilate synthase component II signature 297 310 - -
Lele54g1352 331 PRINTS Anthranilate synthase component II signature 174 183 - -
Lele54g1352 331 PRINTS Anthranilate synthase component II signature 129 143 - -
Lele54g1352 331 PRINTS Anthranilate synthase component II signature 227 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1352 Lele-ChrLele54 18539458 18546912 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1352 54 18539458 18546912 Lele55g0100 55 615768 618665 hybridization
Lele54g1352 54 18539458 18546912 Lele56g0100 56 1053152 1057093 hybridization