Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0100 ATGGAAGCTACTCTGCTCTCTCAGGCTTCGTTCCTTCGACCCAGTCGTTCTCTGAATCCCAGAGCTCACCAGTTTCCTCTCGTGGCTGAGAATCTCCGAATCAAGCCTACTCCCTCAAATGTACGGTATTTGGCCAAAATGGAGAATGGGTTCGTCCCAACAGCCTCGGCGGGTGTCTTGACATCGAATTCTACCTCTCCAGTCTCAGTCACAGCCGCCACTAGTCCGATTATTGTCATTGACAACTACGACAGTTTTACCTATAATCTTTGCCAGTACATGGGAGAGCTGGGATTTCACTTTGAGGTATACCGCAATGATGAGTTAACAATTGAGGAGTTAAAGAGGAAAAATCCTAAAGGTGTGTTAATATCACCTGGTCCTGGCGCACCTCAAGATTCTGGCATATCTTTGCAAACAGTTTTGGAACTTGGACCAACTGTACCTTTGTTTGGTGTGTGCATGGGCTTGCAATGTATTGGAGAGGCTTTTGGAGGAAAGATTGTGCGTTCTCCTCTAGGTGTTATGCATGGAAAAAGCTCTTTGGTGTATTATGACGAGAAGGGAGAAGACGGAGTATTGTCTGGGTTATCAAACCCTTTCACTGCTGGTAGATATCATAGCCTTGTGATTGAAGAAGAGAGTTTTCCTCATGAAGAACTTGAGGTAACAGCCTGGACAGAGGATGGTCTTATAATGGCTGCCCGTCATAAGAGATATAAGCATCTGCAGGGGGTTCAGTTTCATCCTGAGAGCATCATAACCACCGAAGGCAAGACGATTGTCCGCAATTTTGTCAAGCTTATAGAGAAAAAGGAGGCCGAGGCTTTATCAAAATAA 840 0.4536 MEATLLSQASFLRPSRSLNPRAHQFPLVAENLRIKPTPSNVRYLAKMENGFVPTASAGVLTSNSTSPVSVTAATSPIIVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTIEELKRKNPKGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGVLSGLSNPFTAGRYHSLVIEEESFPHEELEVTAWTEDGLIMAARHKRYKHLQGVQFHPESIITTEGKTIVRNFVKLIEKKEAEALSK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0100 279 SUPERFAMILY Class I glutamine amidotransferase-like 77 271 IPR029062 -
Lele55g0100 279 Pfam Glutamine amidotransferase class-I 79 266 IPR017926 -
Lele55g0100 279 Gene3D - 75 268 IPR029062 -
Lele55g0100 279 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 77 267 IPR006221 -
Lele55g0100 279 PRINTS Glutamine amidotransferase superfamily signature 245 258 - -
Lele55g0100 279 PRINTS Glutamine amidotransferase superfamily signature 122 131 - -
Lele55g0100 279 PRINTS Glutamine amidotransferase superfamily signature 149 160 - -
Lele55g0100 279 FunFam Anthranilate synthase beta subunit 1 75 268 - -
Lele55g0100 279 PRINTS Anthranilate synthase component II signature 122 131 - -
Lele55g0100 279 PRINTS Anthranilate synthase component II signature 77 91 - -
Lele55g0100 279 PRINTS Anthranilate synthase component II signature 175 183 - -
Lele55g0100 279 PRINTS Anthranilate synthase component II signature 198 210 - -
Lele55g0100 279 PRINTS Anthranilate synthase component II signature 149 160 - -
Lele55g0100 279 PRINTS Anthranilate synthase component II signature 245 258 - -
Lele55g0100 279 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 119 133 - -
Lele55g0100 279 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 149 165 - -
Lele55g0100 279 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 76 275 - -
Lele55g0100 279 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 71 273 - -
Lele55g0100 279 CDD GATase1_Anthranilate_Synthase 77 266 IPR006221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0100 Lele-ChrLele55 615768 618665 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1376 53 21911842 21914738 Lele55g0100 55 615768 618665 hybridization
Lele54g1352 54 18539458 18546912 Lele55g0100 55 615768 618665 hybridization