Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0100 ATGAGAACATCATGGCCAACGCCATTTTCTCTACAGCAGGGCGTACCGTTGTGTTTATTTCCCAAGTATGAATTTGTCACTTGCCACCGTCGACAGAGTGAACTGGAGACTGTCAAAATCAGGTGCTTCCCATGGAATCTAGCGGTATTGTTGAATATTCCCACTATGGCAACGACTCCGCTCTCCCTGGCTTCCGTCCTTCAACCCAATCGTTCTCTGAATCTCAGAGCTCAACAGTTTCCTCGCGTGGCTCAGGATCTCCGAATGAAGCCTACTCCCTCAAATGTTCGGTATTTGGTCAAAATGGAGAATGGGTTCGTCCCAAAAGCCTCGGCTGCTGTCTTGACATCGAATTCTAACTCTGCAGTCCCAGTCACGGCGGCCACTAGTCCCATTGTTGTCATTGACAACTACGACAGTTTTACCTATAATCTTTGCCAGTACATGGGAGAGCTGGGATTTCACTTTGAGGTGTACCGCAATGATGAGTTAACAATTGAGGAGTTAAAGAGGAAAAATCCTAGAGGTGTGCTAATATCACCTGGTCCTGGCGCCCCTCAAGATTCTGGCATATCTTTGCAGACAGTTTTGGAACTTGGACCAACTGTACCTTTGTTTGGTGTGTGCATGGGCCTCCAATGTATTGGAGAGGCTTTTGGAGGAAAGATTGTGCGTTCTCCTCTAGGCGTCATGCATGGAAAAAGCTCTTTGGTATATTATGACGAGAAGGGAGAAGACGGAGTATTGTCTGGGTTATCAAACCCTTTCACTGCTGGTAGATATCATAGCCTTGTGATTGAAAAAGAGAGCTTTCCTCATGAAGAACTTGAGGTAACGGCCTGGACAGAGGATGGCCTTGTAATGGCTGCCCGTCATAAGAGATATAAGCATCTGCAGGGGGTTCAATTTCATCCAGAGAGCATCATAACCACCGAAGGCAAGACGATTGTCCGCAATTTTGTCAAGCTTATAGAGAAAAAGGAGGCTGAGGCTTTATCAAAATAA 1005 0.4627 MRTSWPTPFSLQQGVPLCLFPKYEFVTCHRRQSELETVKIRCFPWNLAVLLNIPTMATTPLSLASVLQPNRSLNLRAQQFPRVAQDLRMKPTPSNVRYLVKMENGFVPKASAAVLTSNSNSAVPVTAATSPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTIEELKRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGVLSGLSNPFTAGRYHSLVIEKESFPHEELEVTAWTEDGLVMAARHKRYKHLQGVQFHPESIITTEGKTIVRNFVKLIEKKEAEALSK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0100 334 PRINTS Anthranilate synthase component II signature 132 146 - -
Lele56g0100 334 PRINTS Anthranilate synthase component II signature 300 313 - -
Lele56g0100 334 PRINTS Anthranilate synthase component II signature 177 186 - -
Lele56g0100 334 PRINTS Anthranilate synthase component II signature 204 215 - -
Lele56g0100 334 PRINTS Anthranilate synthase component II signature 230 238 - -
Lele56g0100 334 PRINTS Anthranilate synthase component II signature 253 265 - -
Lele56g0100 334 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 121 328 - -
Lele56g0100 334 FunFam Anthranilate synthase beta subunit 1 130 323 - -
Lele56g0100 334 PRINTS Glutamine amidotransferase superfamily signature 300 313 - -
Lele56g0100 334 PRINTS Glutamine amidotransferase superfamily signature 204 215 - -
Lele56g0100 334 PRINTS Glutamine amidotransferase superfamily signature 177 186 - -
Lele56g0100 334 Pfam Glutamine amidotransferase class-I 133 321 IPR017926 -
Lele56g0100 334 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 131 330 - -
Lele56g0100 334 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 204 220 - -
Lele56g0100 334 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 174 188 - -
Lele56g0100 334 CDD GATase1_Anthranilate_Synthase 132 321 IPR006221 -
Lele56g0100 334 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 132 322 IPR006221 -
Lele56g0100 334 Gene3D - 130 323 IPR029062 -
Lele56g0100 334 SUPERFAMILY Class I glutamine amidotransferase-like 131 326 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0100 Lele-ChrLele56 1053152 1057093 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1376 53 21911842 21914738 Lele56g0100 56 1053152 1057093 hybridization
Lele54g1352 54 18539458 18546912 Lele56g0100 56 1053152 1057093 hybridization