Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0669 ATGTCCACGACATCTCACTCCTACAAGGCCATCTTCGCCTTCCTCATTGCCGCTGCCGTTATTTTTCTGGTATCATCGGACTCCGGTGAAATTCTCAAGTTCAGGGAAGCTCCGGCATTCCGAAACGGCTGGGAATGTTCCGAAACGTCATGGTCGACCTCCGACAAACGAGTTCACAACCCTTCCATTATCCATATAGCCATGACTCTCGATATCGCTTACCTCCGTGGCTCCGTGGCCGCCGTCTTCTCCGTTCTCCGACACGCGTTTTGCCCGGAGAATGTGGTTTTCCACTTTATCACCTCCTTGCACAGCCAGTCCGAGCTCTACCGGATAATCTCCGCCACTTTTCCGTACCTAGAATTCCACTTTTACCGCTTTGACTCAAACGTCGTCAGGGGAAAGATCTCGTATTCCGTTCGCCGAGCTCTCGACCAGCCTCTCAATTACGCAAGGATGTACCTGGCCGATCTCTTGCCGGCCGGCGTCCGCCGTATAATCTACTTCGATTCCGATCTGATCCTGGTGGATGACGTGGCAAAGCTCTGGAATATCAATTTGGGAGCGCACGTTTTGGGCGCGCCCGAGTATTGTCACGCCAATTTCACCAACTACTTCACGACCAAGTTCTGGTCAACCCCGGTCTATGCGGCGTCGTTTCGTGGCCGTAAACCCTGCTATTTCAACACGGGGGTTATGGTCATAGATCTGTGGAAATGGAGGGAAGGTAAGTACCCGGAGAAGCTTGAGACGTGGATGAGGATTCAGAAGCGGCACCGAATCTACGAACTCGGTTCTCTGCCGCCGTTCTTGCTGGCGTTCGCCGGAAACGTCGAGAGGGTGGATCATAGGTGGAACCAGCATGGGCTCGGCGGGGACAATCTCAAAGGTTTATGCAGAGAACTTCATCCAGGACCCGTGAGCCTACTTCACTGGAGTGGGAAAGGGAAGCCATGGCTGAGACTTGACGCGAAAAGGCCATGCCCTTTGGATAGCTTGTGGGCCCCATATGATCTGTTTCACCACTCTTCGTTGTAA 1038 0.5328 MSTTSHSYKAIFAFLIAAAVIFLVSSDSGEILKFREAPAFRNGWECSETSWSTSDKRVHNPSIIHIAMTLDIAYLRGSVAAVFSVLRHAFCPENVVFHFITSLHSQSELYRIISATFPYLEFHFYRFDSNVVRGKISYSVRRALDQPLNYARMYLADLLPAGVRRIIYFDSDLILVDDVAKLWNINLGAHVLGAPEYCHANFTNYFTTKFWSTPVYAASFRGRKPCYFNTGVMVIDLWKWREGKYPEKLETWMRIQKRHRIYELGSLPPFLLAFAGNVERVDHRWNQHGLGGDNLKGLCRELHPGPVSLLHWSGKGKPWLRLDAKRPCPLDSLWAPYDLFHHSSL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0669 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 44 328 IPR029044 -
Lele54g0669 345 Pfam Glycosyl transferase family 8 65 321 IPR002495 GO:0016757
Lele54g0669 345 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 343 - -
Lele54g0669 345 FunFam Hexosyltransferase 65 328 - -
Lele54g0669 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 64 342 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0669 Lele-ChrLele54 13616262 13617299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0669 20 345 Glycosyltransferase AT1G13250 74.233 4.52e-176 490
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0669 54 13616262 13617299 Lele55g0830 55 5680742 5681791 hybridization
Lele54g0669 54 13616262 13617299 Lele56g0772 56 5860916 5866073 hybridization