Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0830 ATGGCAACGACATCTAACCGCTACAGGCCAATCTTCGCCTTCCTCCTTGCCGCTGTCGTTATTTTTCTGATATCATCGAACTCCGGCGAACTTCTCAAGTTTAGGGAAGCTCCCGCATTTCGAAACGGCTGGGAATGTTCCGAAACGTCATGGTCGAACTCCGAAAAACGAGTTCACCACCCTTCCATTATCCATATAGCCATGACTCTCGATACCGCTTACCTCCGTGGCTCCGTGGCCGCCGTCTTCTCCGTTCTTCGACACTCGTCTTGCCCGGAGAATCTGGTTTTCCACTTTATCACCGCCTCGCACAGCCAGTCCGAACTCTACCGGATAATCTCCGCCACTTTTCCGTACCTAGAATTCCACTTTTACCGCTTTGACTCAAACGTCGTCAGGGGAAAGATCTCGTATTCCGTTCGCCGAGCACTCGACCAGCCTCTCAATTACGCAAGGATGTACCTAGCCGCTCTCTTGCCGGCCGGCGTCCGCCGCATAATCTACTTCGATTCCGATCTGATCCTTGTGGATGACGTGGCAAAGCTCTGGAATATCGATTTGGGAGCGCACGTTTTGGGCGCGCCCGAGTATTGTCACGCCAATTTCACCCACTACTTCACGCCCGAGTTCTGGTCAAACCCGGTCTATACGGCGTCGTTTCGTGGACGTAATCCCTGCTATTTCAACACGGGGGTGATGGTCATAGATCTGTGGAAATGGAAGGAAGGTAGGTACACGGAGAAGCTAGAAACGTGGATGAAGATTCAGAAGAGGCACCGAATCTATGAGCTCGGTTCTCTGCCGCCGTTCTTGCTGGCGTTCGCTGGAAACGTTGAGAGGGTGGATCACAGGTGGAACCAGCATGGGCTCGGCGGTAACAATCTCAAAGGTTTATGCAGAGAACTTCATCCGGGTCCTGTTAGCTTACTTCACTGGAGTGGGAAGGGGAAGCCATGGCTGAGACTTGACGCTAAAAGGCCATGCCCTTTGGATAGCTTGTGGGCCCCATATGATCTGTTTCATCACTCTTTGTTGTTCTCTCATAGCTAG 1050 0.5219 MATTSNRYRPIFAFLLAAVVIFLISSNSGELLKFREAPAFRNGWECSETSWSNSEKRVHHPSIIHIAMTLDTAYLRGSVAAVFSVLRHSSCPENLVFHFITASHSQSELYRIISATFPYLEFHFYRFDSNVVRGKISYSVRRALDQPLNYARMYLAALLPAGVRRIIYFDSDLILVDDVAKLWNIDLGAHVLGAPEYCHANFTHYFTPEFWSNPVYTASFRGRNPCYFNTGVMVIDLWKWKEGRYTEKLETWMKIQKRHRIYELGSLPPFLLAFAGNVERVDHRWNQHGLGGNNLKGLCRELHPGPVSLLHWSGKGKPWLRLDAKRPCPLDSLWAPYDLFHHSLLFSHS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0830 349 Pfam Glycosyl transferase family 8 65 321 IPR002495 GO:0016757
Lele55g0830 349 FunFam Hexosyltransferase 65 328 - -
Lele55g0830 349 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 45 328 IPR029044 -
Lele55g0830 349 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 12 342 - -
Lele55g0830 349 SUPERFAMILY Nucleotide-diphospho-sugar transferases 64 342 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0830 Lele-ChrLele55 5680742 5681791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele55g0830 19 349 Glycosyltransferase AT1G13250 72.205 3.08e-173 483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0659 53 16763469 16764518 Lele55g0830 55 5680742 5681791 hybridization
Lele54g0669 54 13616262 13617299 Lele55g0830 55 5680742 5681791 hybridization