Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0772 ATGTCAACGACATCTCACTCCTACAAGGCAATCTTCGCCTTCCTCCTTGCCGCTGCCGTTATTTTTCTGGTTCTGGTCGATGCGGCGTCGTTTCGTGGCCGTAAATCCTGCTATTTCAACACGGGGGTTATGGTCATAGATCTGTGGAAATGGAGGGAAGGTAAGTACACGGAGAAGCTTGAGACGTGGATGAGGATTCAGAAGCGGCACCGAATCTACGAACTCGGTTCTCTGCCGCCGTTCTTGCTGGCGTTCACCGGAAATGTCGAGAGGATGGATCATAGGTGGAACCAGCATGGGCTCGGCGGTGACAATCTCAAAGGTTTATGCAGAGAACTTCATCCAGGACCCGTGAGCCTACTTCACTGGAGTGGGAAAGGGAAGCCATGGCTGATACTCTACGCGAAAAGGCCATGCCCTTTGGATAGCTTGTGGGCCCCATATGATCTGTTGAAAGCATCTTTGTCCTGTACTGAATCTACCATGTTTTGGTTCAGCTTGATTTGATTGTTTCATTCTAAGAAAGCTAACAGGAAAAAACTGTATATGGTGTCTTCTGCACCAGAAAGACAGATGGAGGATTTTAATATTGTGTTAAATGACTGTTGTGAAGTGTATGACAAGGTTTCAGGATCATTGTCACTGAAATATAAGGATTGCATTTGCATAACTTCTTGTTGGTCTGATCAAATAAGATCCCTCATCCAGGCTTCCTCTTACGATAAAAGTGATAGATTAATCACCGCATCATATTTCATCAAGTCAGATATATGTGGTTGTCGACTACTTAGAAAACCTTGCAATTTTCACCCACAGGAATCCATTCATCACAGATTACAATATATTTCTTATCCTTTTCAAATGCCAGGGACAATCTTGCAGATCTATCTGGTATCTGAGACGGAGAAAAATGTACCTGATAGAGCTGCAAGATTGTCCATAGCAGATGACGTGAGGAAAATACGGATCCCTATTGGTGAAAATTGCAAGAATTCAGCAAAGAAAACTGTGCTTAGAGGTGGGAGTTCCTGA 1032 0.4399 MSTTSHSYKAIFAFLLAAAVIFLVLVDAASFRGRKSCYFNTGVMVIDLWKWREGKYTEKLETWMRIQKRHRIYELGSLPPFLLAFTGNVERMDHRWNQHGLGGDNLKGLCRELHPGPVSLLHWSGKGKPWLILYAKRPCPLDSLWAPYDLLKASLSCTESTMFWFSLIXLFHSKKANRKKLYMVSSAPERQMEDFNIVLNDCCEVYDKVSGSLSLKYKDCICITSCWSDQIRSLIQASSYDKSDRLITASYFIKSDICGCRLLRKPCNFHPQESIHHRLQYISYPFQMPGTILQIYLVSETEKNVPDRAARLSIADDVRKIRIPIGENCKNSAKKTVLRGGSS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0772 343 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 30 153 - -
Lele56g0772 343 Pfam Glycosyl transferase family 8 32 131 IPR002495 GO:0016757
Lele56g0772 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 33 150 IPR029044 -
Lele56g0772 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 12 141 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0772 Lele-ChrLele56 5860916 5866073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0772 29 160 Glycosyltransferase AT1G13250 76.515 1.45e-71 224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0659 53 16763469 16764518 Lele56g0772 56 5860916 5866073 hybridization
Lele54g0669 54 13616262 13617299 Lele56g0772 56 5860916 5866073 hybridization