Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0374 ATGGGTGAGGATGGCAACTTCCATTTTCGATCTCCATCTTTACCCACATCAGATCTGCAAGCTTTTTCGATCTCTATAGCCATCGGCAACAAACTCAACGACGAAGGCCAGCTTTGTATTCTACTACTCAAGTTAAACCCAGAAATGTCGATCACCTTGCAGACTCCGCCCTCTGCTTTTCTGGCAGCTTCATCATACATTCAGCGACGATCTAGATTTTCAGTTGCTTCCACTCCTCCTCCTTCTCTACTCTTCAAATCTCACCGACTCTTCCCTCAAATCCGTGCCTCCGCTGGATCCTCTTCCTCTCTCGACACCGGTCTTATCACTGAATTGGATGCTGTGTCAGGCTTCAGCGAGATAGTTCCTGATACTGTCATTTTCGATGATTTCGAAAGGTTCCCTCCTACGGCTGCTACAGTCAGTTCATCGCTTCTCCTGGGTATATGTGGCCTTCCAGACACAATATTTAAGAATGCTGTGGATATGGCTTTGGCAGATTCTGAGTGTTCTGGGCTTGCAAGCTCTCACGAAAGATTACCTTGTTTCTTTAACAAGGCTTTAGTGAATGTGGGGGGTGATCTGGCAAGACTAGTCCCTGGTCGTGTTTCAACTGAAGTGGATGCACGTCTTGCTTATGACACACATGGCATCATCGGGAAGGTGCATGACCTTTTGAAGTTGTACAATGATATTAATGTTCCTCCTGAACGCCTATTGTTTAAAATTCCTTCAACCTGGCAAGGAATAGAGGCTGCAAAGTTGCTTGAATCTGAGGAAATACAAACACATTTGACTTTTGTTTACAGCTTTGCCCAAGCTGCTGCTGCAGCCCAAGCTGGTGCTTCGGTTATCCAAATTTTTGTTGGTCGCCTTAGGGACTGGGCACGGAATCATTCAGGAGACAGAGAGATAGAATCCGCCCTAGCAAGAGGAGAAGATCCTGGTTTGACATTGGTGAAAAAGGCTTACAATTATATTCATAAATATGGACATAAGTCGAAGTTGATGGCAGTAGCTGTACGCAACAAGCAGGACTTGTTGAGTCTTCTGGGGGTTGACTATATGGTAGCCCCATTGAAGGTTTTGCAATCTCTCAAAGAATCTGTCACTTCTCCTGATGAGAAGTACTCTTTTGTTAGAAGACTGTCCCCTCAGTCTGCTGCTAATTACACATTTAGTGATGAAGAGCTTGTGAAGTGGGACCAAATGAACCTTGCTTCAGCAATGGGGCCAGCAGCTGTGCAACTTCTTGCTGCTGGACTGGATAGCAATGCTGATCAAGCGAAGCGAGTGGAGGAGTTATTTGGCAAGATCTGGCCTCCCCCAAATGTATTTGTGAAACTGGATGAGTTTCAGGGGACATTTGTGTTGATGAGTTGGTGTGAGGGAAAGGGTCATTACCAATCAATATCATCATCATTAGGCAGTAGGCACATGGCTTTCTCGAAGGCTTTATTGCTCCGTCTCTTCTGCATTTGCTTTCTTTTGAGCTCGTCTTCTGCACTGGACGCTACTGTTTCCTACAACTTTGCTGTTTCTTACATTACTGCCTCTCCTCTTGGAGTTATTGCTGTCAACGGCAAGTTTCCTGGTCCTACTATTAACGTGACCACAAATAACAATGTTGCGGTCAATGTTCGGAACAAATTGGCTGAGAATCTCCTCATTCATTGACAGGTCTGGGATTCAGCAAATGCAAAGCTCTTGGCAAGATGGGGTTCTTGGCACAAATTGCCCCATTCCTCCAAAGTGGAACTGGACATACTAGTTTTAGGTGAAGGATCAGATTGGAAGTTTCTTCTACTTTCCTTGATTAAATTTCCTGATAGCAGCTGGCCACAAGACATTTCTTCTGCTCCATCATGTATGAATGAGAATAACAGGAAGCTGTTGTTGACTTGGCTGGTATTTCTAAGCTTCTCATTCTTCATTACTTTCTGGAGAATCCTTTTGGTTGAGTTTCTTGCAATTGTGATCGAAGTAACTTTGGCCCTTTGA 2001 0.4458 MGEDGNFHFRSPSLPTSDLQAFSISIAIGNKLNDEGQLCILLLKLNPEMSITLQTPPSAFLAASSYIQRRSRFSVASTPPPSLLFKSHRLFPQIRASAGSSSSLDTGLITELDAVSGFSEIVPDTVIFDDFERFPPTAATVSSSLLLGICGLPDTIFKNAVDMALADSECSGLASSHERLPCFFNKALVNVGGDLARLVPGRVSTEVDARLAYDTHGIIGKVHDLLKLYNDINVPPERLLFKIPSTWQGIEAAKLLESEEIQTHLTFVYSFAQAAAAAQAGASVIQIFVGRLRDWARNHSGDREIESALARGEDPGLTLVKKAYNYIHKYGHKSKLMAVAVRNKQDLLSLLGVDYMVAPLKVLQSLKESVTSPDEKYSFVRRLSPQSAANYTFSDEELVKWDQMNLASAMGPAAVQLLAAGLDSNADQAKRVEELFGKIWPPPNVFVKLDEFQGTFVLMSWCEGKGHYQSISSSLGSRHMAFSKALLLRLFCICFLLSSSSALDATVSYNFAVSYITASPLGVIAVNGKFPGPTINVTTNNNVAVNVRNKLAENLLIHXQVWDSANAKLLARWGSWHKLPHSSKVELDILVLGEGSDWKFLLLSLIKFPDSSWPQDISSAPSCMNENNRKLLLTWLVFLSFSFFITFWRILLVEFLAIVIEVTLAL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0374 666 Gene3D - 498 577 IPR008972 -
Lele54g0374 666 Pfam Multicopper oxidase 522 560 IPR011707 GO:0005507
Lele54g0374 666 CDD Transaldolase_TalAB 110 436 IPR004730 GO:0004801|GO:0005737|GO:0006098
Lele54g0374 666 FunFam Transaldolase B 109 439 - -
Lele54g0374 666 SUPERFAMILY Cupredoxins 487 559 IPR008972 -
Lele54g0374 666 SUPERFAMILY Aldolase 110 440 - -
Lele54g0374 666 Pfam Transaldolase/Fructose-6-phosphate aldolase 155 433 IPR001585 GO:0005975
Lele54g0374 666 PANTHER TRANSALDOLASE 105 440 IPR001585 GO:0005975
Lele54g0374 666 Gene3D Aldolase class I 109 439 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0374 Lele-ChrLele54 3324552 3335960 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0374 54 3324552 3335960 Lele55g1121 55 17562705 17568063 hybridization
Lele54g0374 54 3324552 3335960 Lele56g1068 56 14032216 14038415 hybridization