Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1068 ATGGGTGAGGACAGTGACTTCCATTTTCTATCTCCATCTTTACCTACATCAGATTTGCAAGCTTCTTCAATCTCCATAGCCACCAGCCAGCTTTGTATTCTACCACTCAAGTTAAACCCAGAAATGTCGATCACCTTGCAGACTCCGCCCTCTGCTTCTCTGGCAGCTTCATCATACATTCAGCGACGATCTAGATTTTCAGCTGCTTCCCCTCCTCCTCCTTCTCTACTCTTCAAATCTCACCGACTCTTCCCTCAAATCCGTGCCTCCGCTGGATCCTCTTCCTCTCTCGACACCGGTCTTATCACTGAATTGGATGCTGTGTCAGGCTTCAGCGAGATAGTTCCTGATACCGTCATTTTCGATGATTTCGAAAGGTTCCCTCCTACGGCTGCTACAGTCAGTTCATCGCTTCTCTTGGGTATATGTGGCCTTCCAGACACAATATTTAAGAATGCTGTGGATATTGCTTTGGCAGATTCTGAGTGTTCTGGGCTTGCAAGCTCTCACGAAAGATTGCCTTGTTTCTTTAACAAGGCTTTAGTGAATGTGGGGGGTGATCTGGCAAGACTAGTCCCTGGTCGTGTTTCAACTGAAGTGGATGCCCGTCTTGCTTATGACACACATGGCATCATCGGGAAGGTGCATGACCTTTTGAAGTTGTACAATGATATTAATGTTCCACCTGAACGCCTATTGTTTAAAATTCCTTCAACCTGGCAAGGAATAGAGGCTGCAAAGTTGCTTGAATCTGAGGGCATACAAACACATTTGACTTTTGTTTACAGCTTTGCGCAAGCTGCTGCTGCAGCCCAAGCTGGTGCTTCTGTTATCCAAATTTTTGTTGGTCGCCTTAGGGACTGGGCACGGAATCATTCAGGAGACCGAGAGATAGAATCCGCCCTAGCAAGAGGAGAAGATCCTGGTTTGACATTGGTGAAAAAGGCTTACAATTATATTCATAAATATGGACATAAGTCAAAGTTGATGGCAGTAGCTGTACGCAACAAGCAGGACTTATTGAGTCTTCTGGGGGTTGACTATATCGTGGCACCATTGAAGGTTTTGCAATCTCTCAAAGAATCGGTCACTTCTCCTGATGAGAAGTACTCTTTTGTTAGAAGACTGTCCCCTCAGTCTGCTGCTAATTACACATTTAGTGATGAAGAGCTTGTGAAGTGGGACCAAATGAACCTTGCTTCAGCAATGGGGCCAGCAGCTGTGCAACTTCTTGCTGCTGGATTGGATAGCAATGCTGATCAAGCGAAGCGAGTGGAGGAGTTATTTGGCAAGCTCTGGCCTCCCCCAAATGTATGA 1317 0.4601 MGEDSDFHFLSPSLPTSDLQASSISIATSQLCILPLKLNPEMSITLQTPPSASLAASSYIQRRSRFSAASPPPPSLLFKSHRLFPQIRASAGSSSSLDTGLITELDAVSGFSEIVPDTVIFDDFERFPPTAATVSSSLLLGICGLPDTIFKNAVDIALADSECSGLASSHERLPCFFNKALVNVGGDLARLVPGRVSTEVDARLAYDTHGIIGKVHDLLKLYNDINVPPERLLFKIPSTWQGIEAAKLLESEGIQTHLTFVYSFAQAAAAAQAGASVIQIFVGRLRDWARNHSGDREIESALARGEDPGLTLVKKAYNYIHKYGHKSKLMAVAVRNKQDLLSLLGVDYIVAPLKVLQSLKESVTSPDEKYSFVRRLSPQSAANYTFSDEELVKWDQMNLASAMGPAAVQLLAAGLDSNADQAKRVEELFGKLWPPPNV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1068 438 Gene3D Aldolase class I 102 432 IPR013785 -
Lele56g1068 438 CDD Transaldolase_TalAB 103 429 IPR004730 GO:0004801|GO:0005737|GO:0006098
Lele56g1068 438 SUPERFAMILY Aldolase 103 433 - -
Lele56g1068 438 Pfam Transaldolase/Fructose-6-phosphate aldolase 149 426 IPR001585 GO:0005975
Lele56g1068 438 PANTHER TRANSALDOLASE 98 432 IPR001585 GO:0005975
Lele56g1068 438 FunFam Transaldolase B 102 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1068 Lele-ChrLele56 14032216 14038415 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0368 53 3356175 3361243 Lele56g1068 56 14032216 14038415 hybridization
Lele54g0374 54 3324552 3335960 Lele56g1068 56 14032216 14038415 hybridization