Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1121 ATGCATTCAGCTGATTCCACTCCAGCTCTACTCTTCAGATCTCGCCGACTTTTCCCTCAAGTCCGCGCCTCCTCTGGATCCTCTTCTTCTCTCGACTCCGGTCTTATCACTGAATTGGATGCTGTGTCGGGCTTCAGTGAGATAGTTCCTGACACTGTCATTTTTGATGATTTCGAAAGAATGCCGTGGATACGGCTTTGGCAGATTCTGAGTGTACCGGGCTTGCAAGTTCTGACGCAAGATTGCCTTGCTTTAGTGAATGTGGGGGGCGATCTGGCAAAACTAGTCCCTGGTCGTGTTTCAACTGAAGTGGATGCACGTCTTGCTTATGACACACATGGCATCATCAGGAAGGTGCATGACCTTTTGAAGTTGTACAATGATATTAATGTTCCTCCTGAACGCATATTGTTTAAAATTCCTTCAACCTGGCAAGGAATAGAGGCTGCAAAGTTGCTTGAATATGAGGGCATACAAACACATTTGACTTTTGTTTACAGCTTTGCCCAAGCTGGTGCTTCTGTTATCCAAATTTTTGTTGGTCGCCTTAGGGACTGGGCACGGAATCATTCAGGAGACCGAGAGATAGAATCTGCCCTAGCAAGAGAAGATCCTGGTTTGACATTGGTTAAAAAGGTTTACAATTATATTCATAAATATGGACATAAGTCAAAGTTGATGGCAGCAGCTGTACGCAACAAGCAGGACTTATTGAGTCTTCTGGGGGTTGACTATATCGTAGCGCCATTGAAGGTTTTGCAGTCTCTCAAAGAATCTGTCACTTCTCCTGATGAGAAGTACTCTTTTGTTAGAAGACTGTCCCCTCAGTCTGCTGCTAACTATACATTTAGTGATGAAGAGCTTGTGAAGTGGGACCAAATGAGCCTTGCATCAGCAATGGGGCCGGCAGCTGTGCAACTTCTGGCTGCTGGACTGGATAGCAATTCTGATCAAGCGCAGCGAAGCAGCTTTTGTCGCCTTCCCACATTATGGAATGTTCTGAGAAGTGGGTGTAAATTACACAAAGATAAACTTCTGCCTTCTGCAAGCCTCTGTCTTGAACCTCAGAAAGACTAG 1077 0.4531 MHSADSTPALLFRSRRLFPQVRASSGSSSSLDSGLITELDAVSGFSEIVPDTVIFDDFERMPWIRLWQILSVPGLQVLTQDCLALVNVGGDLAKLVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYNDINVPPERILFKIPSTWQGIEAAKLLEYEGIQTHLTFVYSFAQAGASVIQIFVGRLRDWARNHSGDREIESALAREDPGLTLVKKVYNYIHKYGHKSKLMAAAVRNKQDLLSLLGVDYIVAPLKVLQSLKESVTSPDEKYSFVRRLSPQSAANYTFSDEELVKWDQMSLASAMGPAAVQLLAAGLDSNSDQAQRSSFCRLPTLWNVLRSGCKLHKDKLLPSASLCLEPQKD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1121 358 PANTHER TRANSALDOLASE 84 321 IPR001585 GO:0005975
Lele55g1121 358 FunFam Transaldolase B 75 324 - -
Lele55g1121 358 Pfam Transaldolase/Fructose-6-phosphate aldolase 86 274 IPR001585 GO:0005975
Lele55g1121 358 SUPERFAMILY Aldolase 38 318 - -
Lele55g1121 358 Gene3D Aldolase class I 37 323 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1121 Lele-ChrLele55 17562705 17568063 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0368 53 3356175 3361243 Lele55g1121 55 17562705 17568063 hybridization
Lele54g0374 54 3324552 3335960 Lele55g1121 55 17562705 17568063 hybridization