Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0368 ATGCGGGTGAAAGAAATGCATCCTCTTTGCTGTATCTCGCTGGAGAGTCCTGGAATCGGGAATCAATCTCCGGAGGCGTCGCTTTCCAGGACTAGGAGTTTGCCTGCGAGTTTGGCTGCAGTCGGATCTGAGAGCAATGCCTGTGGGCGGGGTCGGGGATCCGAGGCCACCGTGGCTGGGATCCTCTATAAGTGGACCAATTACAGCAAAGGATGGAGATCCCGGTGGTTCCTGTTGAAAAATGGCGTCCTCTCTTACTCCAAGATCCTGTGGCCGGAAAACCTCAATCTCCTCACGCCGACCGATGACGTCAGGTTGATTGGCGAAATCTCAACCAACCGATTAGCGAGGATGGACCGCAGCGGGGGGAGTAGTACCGTGCGTCGGAAGAACCAGAAATCTGCGTCTGGCGTAGTCCACCTCAAGGTTTCGTCATTTAGAGAGAGCAAATCAGACGATCGGCGGTTCTATATCTTTACTGCTACCAAGACTCTCCATCTTAGAACCGATTCAAGGAAAGATCGAGAGGCGTGGATACAAGCATTGGAATCTACTCGTTGCTTGCATCCCCTTAGATCACTGAAGGATAATACTTCCCTTGTACCCACTGATATATCTGTATCAACTGAGAGCCTGAAGAAGCGCTTGCTTGAGGAAGAAACCGCTGAGAACGTTGTGAAGGAGTGTGAGCAAATAATGCTCTCTGAGTTCTCGAGAATGCAAAGGCAACTTAAAATTCTTTGTGAAGAGCGATCAAACTTGCTTGATATAATACGGCAGTTGGAGGTTCTGTTGGTTCCAGTGGTTGTGGTTATTTTGCTATCATGGCAGCTAACATTGAACCCGAGGCCTCTGGGATCCATGATGGTGAATACCAAATGCAGTACAACTGAATCATCTGAAGATATAGAGAAACAGGAGATGGAAGAAGTGTCCGATGAAGATGAAATCTCATACTATGACACTGCAGAGCACTTTGCAGAACCTGGTTTCAGGTGTGGGTCGTCAGGACCTCTGGTTCCAGCGGTCAATAATTTTAGTTATCCTCAGATCACAAGACGAAGAAAGCTTCCCGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCTATGATCAAAGACAATGTGGGAAAGGATCTCTCACGTATTTGTCTACCTGTGTACTTTAATGAGCCAATATCTTCCCTTCAGAAATGTTGTGAGGATCTAGAATACTCTTACCTTTTGGACCGAGCTTATGAGTATGGAAAATCGGGAAACAGTCTCCTTCGGGCATTGAATGTTGCAGCCTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGTCACTGTAAACCCTTTAATCCTTTGTTGGGGGAAACTTATGAAGCTGATTTTCCTGAGAAAGGAATTCGCTTCGTTTCTGAAAAGGTCAGTCATCATCCAACTCTCATTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGGAGACAGTAACATTCATTCAAAGTTTTGGGGCAGGTCAATTCAGCTTGATCCAGTGGGAGTTCTGACCCTAGAATTTGACGACGGTGAAATATTTCAGTGGAGTAAGGTCACCACAACGATTTATAATCTTATCCTTGGTAAAATATACTGTGATCATCATGGAAACATGGACATACGCGGTAATCGCCAATATTCATGCAGACTCAAGTTTAAAGAGCAGACTATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATGTCACGGGGAAAAAAGCTGCTGCATTATTTGGAAAGTGGGATGACAGCTTGTACTATGTTATTGGTGATGGGAATGTCAAGTCAAAACATATAACTTCATTAGATGCATCGATGTTGTGGAAAAGGACCAAACCTCCTACTAATCTCACCCGGTACAATATGACATCATTTGCCATCACACTGAACGAGCTTCTACCAGGACTGAAGGAGAAGCTCCCTCCCACGGATTCCAGGCTGCGACCAGACCAGCGGCATCTAGAGAATGGGGAATATGAGAAGGCGAATATGGAGAAACAAAGGTTGGAGAAGAGACAAAGAATGTCAAGGAAAATACAAGAAAATGGCTGGAAACCTAAATGGTTCCATAGAGATGGTGAAAATGGAACATTTAAATATGTGGGCGGGTACTGGCAAGCCAGAGAGCAAGGAAAATGGTATGAATGCCCAAATATATTTGGTGAATTTAATGAAGACTTGGCTGCTTCTTTAGATGCATCTTGA 2244 0.4523 MRVKEMHPLCCISLESPGIGNQSPEASLSRTRSLPASLAAVGSESNACGRGRGSEATVAGILYKWTNYSKGWRSRWFLLKNGVLSYSKILWPENLNLLTPTDDVRLIGEISTNRLARMDRSGGSSTVRRKNQKSASGVVHLKVSSFRESKSDDRRFYIFTATKTLHLRTDSRKDREAWIQALESTRCLHPLRSLKDNTSLVPTDISVSTESLKKRLLEEETAENVVKECEQIMLSEFSRMQRQLKILCEERSNLLDIIRQLEVLLVPVVVVILLSWQLTLNPRPLGSMMVNTKCSTTESSEDIEKQEMEEVSDEDEISYYDTAEHFAEPGFRCGSSGPLVPAVNNFSYPQITRRRKLPDPVEKEKGVSLWSMIKDNVGKDLSRICLPVYFNEPISSLQKCCEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPEKGIRFVSEKVSHHPTLIACHCEGRGWKFWGDSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQTILDRNPHQVHGFVEDVTGKKAAALFGKWDDSLYYVIGDGNVKSKHITSLDASMLWKRTKPPTNLTRYNMTSFAITLNELLPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKIQENGWKPKWFHRDGENGTFKYVGGYWQAREQGKWYECPNIFGEFNEDLAASLDAS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0368 747 Gene3D - 664 727 - -
Lele54g0368 747 Gene3D - 454 627 - -
Lele54g0368 747 ProSiteProfiles PH domain profile. 55 187 IPR001849 -
Lele54g0368 747 Gene3D - 52 188 IPR011993 -
Lele54g0368 747 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 721 IPR000648 GO:0008289
Lele54g0368 747 Pfam Pleckstrin homology domain 60 183 - -
Lele54g0368 747 FunFam Oxysterol-binding protein-related protein 2A 664 735 - -
Lele54g0368 747 SUPERFAMILY PH domain-like 55 184 - -
Lele54g0368 747 Pfam Oxysterol-binding protein 368 722 IPR000648 GO:0008289
Lele54g0368 747 Coils Coil 665 685 - -
Lele54g0368 747 SUPERFAMILY Oxysterol-binding protein-like 363 736 IPR037239 -
Lele54g0368 747 FunFam oxysterol-binding protein-related protein 1D isoform X1 454 625 - -
Lele54g0368 747 SMART PH_update 56 189 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0368 Lele-ChrLele54 3215471 3224404 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0368 54 3215471 3224404 Lele55g1127 55 17694828 17704353 hybridization
Lele54g0368 54 3215471 3224404 Lele56g1075 56 14139991 14148873 hybridization