Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1127 ATGCGGGTAAAAGAAATGCATCCTTTTTGCTGTATCTCGCTGGAGAGTCCCGGAATCGGGAATCAATCTCCAGAGGCGTCATTTTCAAGTACTAGGAGTTTACCTGCGAGTTTGGCTGCAGTCGGATCTGAGCGCAATGCCGGTGGGCGAAGTCGGGGATCGGAGGCGACGGTGGCTGGGATCCTCTATAAGTGGACCAATTACAGCAAAGGATGGAGATCCCGGTGGTTCCTGTTGAAAAATGGCGTCCTCTCTTACGCCAAGATTCGGTGGCCGGAAAACCTCAATCTCCTCACGCCGACCGATGACGTCAGGTTGATTGGCGAAATCTCAACTAACCGATTAGCGAGGATGGACAGCGTGAGTAGTTCGGTGCGTAGGAAGACCCAGAAATCTGCGTCTGGCGTAGTCCACCTCAAGGTTTCGTCATTTAGAGAGAGCAAATCAGACGATCGCCGGTTCTATATCTTTACTGCTACTAAGACTCTCCATCTTAGAACTGATTCAAGGAAATATCGAGAGGCTTGGATACAAGCATTGGAATCTACTCGTTGCTTGCATCCACTTAGATCACTGAAAGATAATATCTCCCTTGTATCAACTGATATGTCTTTATCAACTGAGAGCCTGAAGAAGCGCTTGCTTGAGGAAGGAACCGCTGAGAACGTTGTGAAAGAATGTGAGCAAATAATGCTCTCTGAGTTCTCGAGAATGCAAGGGCAACTTAAAATTCTTTGTGACGAGCGATCAAATTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAACATTGAACCCGAGGCCTCCGGGATCCATGATGGTGAATACCAGTTAGCTAAGCATGAATTTTCAAGTTTAGGACGTGGAAAATATAGTGAATGCAGTACGACTGAATCATCTGAAGATATTGAGAAGCAGGAGATGGAAGAAGTGTCAGATGAAGATGAAATCTCATACTATGACACTGCTGAGCACTTTGCAGAACCTGGTTTCAGGTGTGGTTCGTCAGTACCTCTGGTTCCAGCGGACAATAATTGTAGTTATCCTCAGATCACAAGACGAAGACAGCTTCCTGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCTATGATCAAAGACAATGTGGGAAAGGATCTCTCACGTATTTGCCTTCCCGTGTACTTTAATGAGCCAATATCTTCCCTTCAGAAATGTTGTGAGGACCTAGAATACTCTTACCTTTTGGACCGAGCTTATGAGTATGGAACATCGGGAAACCGTCTCCTTCGGGCACTAAATGTTGCAGCCTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGTTACTGCAAACCCTTTAATCCTTTGTTGGGGGAAACGTATGAAGCTGATTTTCCTGAGAAAGGAATTCGCTTCTTTTCTGAAAAGGTCAGTCATCATCCAACTCTCATTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGGTGACAGTAACATTCATTCAAAGTTTTGGGGCAGGTCAATTCAGCTTGACCCAGTTGGAGTTCTGACCCTGGAATTTGACGATGGTGAAATCTTTCAGTGGAGTAAGGTCACCACAACTATTTATAATCTTATCCTTGGTAAAATATACTGTGATCATCATGGAAACATGGACATACGTGGAAATCGCCAATATTCATGCAGACTCAAGTTTAAAGAGCAGACTATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATGTCACGGGGAAAAAAGCTGCTGCATTATTTGGAAAGTGGGATGACAGCTTGTACTATGTTATTGGTGATGGGAATGTCAAGTCAAAACATATAACTTCATCAGATGCATCGATGTTGTGGAAAAGGACTAAACCTCCTACTAATCTCACACGGTACAATATGACATCATTTGCCATCACACTGAACGAGCTTGTACCAGGACTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGCTGAGACCAGACCAGCGGCATCTAGAGAATGGGGAATATGAGAAGGCGAATATGGAGAAACAAAGGTTAGAGAAGAGACAAAGAATGTCAAGGAAAATACAAGAAAATGGCTGGAAACCTAAATGGTTCCAAAGAGATGGTGAAAATGGAACATTTAAATATGCGGGCGGGTATTGGGAAGCCAGAGAGCAAGGAAAATGGGATGAATGCCCGAATATATTTGGTGAATTTAATGGAGACTTGGCTGCTTCTTTGGATGCATCTTGA 2244 0.4452 MRVKEMHPFCCISLESPGIGNQSPEASFSSTRSLPASLAAVGSERNAGGRSRGSEATVAGILYKWTNYSKGWRSRWFLLKNGVLSYAKIRWPENLNLLTPTDDVRLIGEISTNRLARMDSVSSSVRRKTQKSASGVVHLKVSSFRESKSDDRRFYIFTATKTLHLRTDSRKYREAWIQALESTRCLHPLRSLKDNISLVSTDMSLSTESLKKRLLEEGTAENVVKECEQIMLSEFSRMQGQLKILCDERSNLLDTIRQLEAANIEPEASGIHDGEYQLAKHEFSSLGRGKYSECSTTESSEDIEKQEMEEVSDEDEISYYDTAEHFAEPGFRCGSSVPLVPADNNCSYPQITRRRQLPDPVEKEKGVSLWSMIKDNVGKDLSRICLPVYFNEPISSLQKCCEDLEYSYLLDRAYEYGTSGNRLLRALNVAAFAVSGYASSEGRYCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWGDSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQTILDRNPHQVHGFVEDVTGKKAAALFGKWDDSLYYVIGDGNVKSKHITSSDASMLWKRTKPPTNLTRYNMTSFAITLNELVPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKIQENGWKPKWFQRDGENGTFKYAGGYWEAREQGKWDECPNIFGEFNGDLAASLDAS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1127 747 Pfam Pleckstrin homology domain 60 181 - -
Lele55g1127 747 FunFam oxysterol-binding protein-related protein 1D isoform X1 454 625 - -
Lele55g1127 747 FunFam Oxysterol-binding protein-related protein 2A 664 735 - -
Lele55g1127 747 Coils Coil 242 262 - -
Lele55g1127 747 Gene3D - 52 186 IPR011993 -
Lele55g1127 747 Gene3D - 664 728 - -
Lele55g1127 747 Gene3D - 454 627 - -
Lele55g1127 747 SMART PH_update 56 187 IPR001849 -
Lele55g1127 747 SUPERFAMILY PH domain-like 54 182 - -
Lele55g1127 747 ProSiteProfiles PH domain profile. 55 185 IPR001849 -
Lele55g1127 747 Coils Coil 665 685 - -
Lele55g1127 747 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 721 IPR000648 GO:0008289
Lele55g1127 747 SUPERFAMILY Oxysterol-binding protein-like 363 738 IPR037239 -
Lele55g1127 747 Pfam Oxysterol-binding protein 368 722 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1127 Lele-ChrLele55 17694828 17704353 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0361 53 3210885 3220448 Lele55g1127 55 17694828 17704353 hybridization
Lele54g0368 54 3215471 3224404 Lele55g1127 55 17694828 17704353 hybridization