Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1075 ATGCGGGTGAAAGAAATGCATCCTCTTTGCTGTATCTCGCTTGAGAGTCCTGGATTCGGGAATCAATCTCCGGAGGCGTCGCTTTCCAGGACTAGGAGTTTGCCTGTGAGTTTGGCTGCAGTCGGATCTGAGCGCAATGCCGGTGGGCGGGGTCGGGGATCCGAGGCCACCGTGGCTGGGATCCTTTATAAGTGGACCAATTACAGCAAAGGATGGAGATCCCGGTGGTTCCTGTTGAAAAATGGCGTCCTCTCTTACGCCAAGATCCGTTGGCCGGAAAACCTCAATCTCCTCACGCCGACCGATGACGTCAGGTTGATTGGCGAAATCTCAACTAACCGATTAGCGAGGATGGACAGCAGCGGGAGTAGTACCGTGCGTCGGAAGAACCAGAAATCTGCGTCTGGCGTAGTCCACCTCAAGGTTTCGTCATTTAGAGAGAGCAAATCAGACGATCGGCGGTTCTATATCTTTACTGCTACCAAGACTCTCCATCTTAGAACTGATTCAAAGAAAGATCGAGAGGAGTGGATACAAGCATTGGAATCTACTCGTTGCTTGCATCCACTTAGATCACTGAAGGATAATACTTCCCTTGTACCCACTGATATATCTATATCAACTGAGAGCCTGAAGAAGCGCTTGCTTGAGGAAGAAACCGCTGAGAACGTTGTGAAGGAGTGTGAGCAAATAATGCTGTCTGAGTTCTCAAGAATGCAAAGGCAACTTAAAATTCTTTGTGAAGAGCGATCAAATTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAACATTGAACCCGAGGCCTCTGGGATCCATGATGGTGAATACCAGTTAACTAAGCATGAATTTTCAAGTTTAGGACGTGGAAAGTATAGTGGTACTCTATACATACAATGCAGTACAACTGAATCATCTGAAGATATAGAGAAACAGGATATGGAAGAAGTGTCCGATGAAGATGAAATCTCATACTATGACACTGCAGAGCACTTTGCAGAGCCTGGTTTCAGGTGTGGGTCGTCAGGACCTCTGGTTCCAGCGGTCAATAATTGTAGTTATCCTCAGATCACAAGACGAAGAAAGCTTCCCGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCTATGATCAAAGACAATGTGGGCAAGGATCTCTCACGTATTTGTCTACCTGTGTACTTTAATGAGCCAATATCTTCCCTTCAGAAATGTTGTGAGGATCTAGAATACTCTTACCTTTTGGACCGAGCTTATGAGTATGGAAAATCGGGAAACAGTCTCCTCCGGGCATTGAATGTTGCAGCTTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGTCACTGTAAACCCTTTAATCCTTTGTTGGGGGAAACTTATGAAGCTGATTTTCCGGAGAAAGGAATTCGCTTCGTTTCTGAAAAGGTCAGTCATCATCCAACTCTCATTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGGAGACAGTAACATTCATTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGATCCAGTGGGAGTTCTGACCCTAGAATTTGACGACGGTGAAATATTTCAGTGGAGTAAGGTCACCACAACGATTTATAATCTTATCCTTGGTAAAATATACTGTGATCATCATGGAAACATGGATATACGAGGTAATCACCAATATTCATGCAGACTCAAGTTTAAAGAGCAGACTATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATGTCACGGGGAAAAAAGCTGCTGCATTATTTGGAAAGTGGGATGACAGCTTGTACTATGTTATAGGGGATGGGAATGTCAAGTCAAAACATATAACTTCATTAGATGCATCGATGTTGTGGAAAAGGACCAAACCTCCTACTAATCTCACACGGTACAATATGACATCATTTGCCATCACCCTGAACGAGCTTCTACCAGGACTGAAGGAGAAGCTCCCTCCCACGGATTCCAGGCTGAGACCGGACCAGCGGCATCTAGAGAATGGGGAATATGAGAAGGCGAATATGGAGAAACAAAGGTTGGAGAAGAGACAAAGAATGTCAAGGAAAATACAAGAAAATGGCTGGAAACCTAAATGGTTCCATAGAGATGGTGAAAATGGAACATTTAAATATGTGGGCGGGTACTGGCAAGCCAGAGAGCAAGGAAAATGGTATGAATGCCCAAATATATTTGGTGAATTTAATGAAGACTTGGCTGCTTCTTTAGATGCATCTTGA 2262 0.4452 MRVKEMHPLCCISLESPGFGNQSPEASLSRTRSLPVSLAAVGSERNAGGRGRGSEATVAGILYKWTNYSKGWRSRWFLLKNGVLSYAKIRWPENLNLLTPTDDVRLIGEISTNRLARMDSSGSSTVRRKNQKSASGVVHLKVSSFRESKSDDRRFYIFTATKTLHLRTDSKKDREEWIQALESTRCLHPLRSLKDNTSLVPTDISISTESLKKRLLEEETAENVVKECEQIMLSEFSRMQRQLKILCEERSNLLDTIRQLEAANIEPEASGIHDGEYQLTKHEFSSLGRGKYSGTLYIQCSTTESSEDIEKQDMEEVSDEDEISYYDTAEHFAEPGFRCGSSGPLVPAVNNCSYPQITRRRKLPDPVEKEKGVSLWSMIKDNVGKDLSRICLPVYFNEPISSLQKCCEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPEKGIRFVSEKVSHHPTLIACHCEGRGWKFWGDSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNHQYSCRLKFKEQTILDRNPHQVHGFVEDVTGKKAAALFGKWDDSLYYVIGDGNVKSKHITSLDASMLWKRTKPPTNLTRYNMTSFAITLNELLPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKIQENGWKPKWFHRDGENGTFKYVGGYWQAREQGKWYECPNIFGEFNEDLAASLDAS 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1075 753 Gene3D - 670 733 - -
Lele56g1075 753 SUPERFAMILY PH domain-like 55 183 - -
Lele56g1075 753 Coils Coil 243 263 - -
Lele56g1075 753 Pfam Pleckstrin homology domain 60 182 - -
Lele56g1075 753 Coils Coil 671 691 - -
Lele56g1075 753 SUPERFAMILY Oxysterol-binding protein-like 369 742 IPR037239 -
Lele56g1075 753 Gene3D - 460 633 - -
Lele56g1075 753 Gene3D - 52 187 IPR011993 -
Lele56g1075 753 Pfam Oxysterol-binding protein 374 728 IPR000648 GO:0008289
Lele56g1075 753 FunFam oxysterol-binding protein-related protein 1D isoform X1 460 631 - -
Lele56g1075 753 SMART PH_update 56 188 IPR001849 -
Lele56g1075 753 FunFam Oxysterol-binding protein-related protein 2A 670 741 - -
Lele56g1075 753 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 727 IPR000648 GO:0008289
Lele56g1075 753 ProSiteProfiles PH domain profile. 55 186 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1075 Lele-ChrLele56 14139991 14148873 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0361 53 3210885 3220448 Lele56g1075 56 14139991 14148873 hybridization
Lele54g0368 54 3215471 3224404 Lele56g1075 56 14139991 14148873 hybridization