Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0261 ATGGTGCCTACGAAGGAGCAACCATCACCGGCCTTTCTTGACACTGTTGAAGAGATTACGAGAATTTACAGATCGCTTCCTCTTCGACCTTCGATTGAAGAAGTCGAAGCTGCCACTTCTGCTATTGAAACTATCAATAGCGAGGAGGATATGAAGCTCCAGGAAATCTCAATGCAGCAAGTCCCCCACGATGTACCCAAGCAGCTTTTCTCTCTGTTACAAGAATTGAAGAAGACCGTTGTCTTGTTTCAGAGCCATGAACTGAGGAAAGAAGCTCTCCACCTTCTTCAACAAGAGAAGATGTTTCAGACCCTTGCTGATCTTATTCAGAGGGCTTCACAGTTCGTTTCTCGGGACGCTACGGACCTGGAAATTACCAATTTAGCCGAACCGGCGGGAAAAATCGAGACAGATGTTTATATCGGTGATGACAGTCTGGTGAAGGGAAAGGAAGACGGAGAAAAACCGGAGAAAATCAACCTCAACGTTGAAAGAAAATCCTCCGCGAAGATATCTTTCTCTGCTGATGATGGAAACTCAGAGAAATTAAGTCTCATGAAAGTTGCCACGGTTATTGAAAACTGTGCTAATAGTGGAGCCGCAATCCTTGAGCTTAGAGGGAAACTTGTGGACCAGATGGAATGGTTGCCTGTTTCAATTGGGAAACTCTCTCATGTCTGTGAAATTGACCTATCTGAGAACAGAATCATGGCTCTTCCTTCCACCTTTGGAGATCTCAAGGCCTTAACAAAGCTTGATCTTCATGCCAACCAGCTTATAAACCTTCCACACACTTTTGGGGAATTGATCAACCTCACTGATCTTGACCTCCGCAGTAATAGATTGAGATCACTGCCAGCTTCTTTTGAAAATTTGGAGAATCTCATTGATCTTGAACTGAGTTCAAATGAGTTCACACAATTACCAGATTTGATTGGGAATTTAAGAAGCTTGAGAAGATTAAATGTTGAGACAAACGAACTTGAGGAGCTACCTTATACAGTTGGAAATTGCTCATCACTCTCAGAGTTGAGATTAGATTTTAATCAGCTCAAAGCCCTTCCTGAGGCAATTGGGAATCTTGAGCTCTTGGAGATTTTAACTCTACACTATAACCGAGTTAAAAGGTTGCCTACTACAATGGGGAACCTGAGCAGATTGAAGGAACTTGATGCTAGCTTTAATGAACTGGAATTTGTACCAGAGAACCTATGTTTTACTGTGAGCCTGAAGAAATTAAATGTGTCAAATAACTTTTCAGACCTAAGAGCCTTGCCAAAATCAATTGGTAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGATGATCAAATAAAAGCATTACCAGAATCTTTCAGGTTCTTGTCCAAATTGAGAGTTTTCCGTGCTGATCAGACTCCTCTTGAAGTACCACCCAGAGAAGTGGTCAAGTTGGGTGCTCAGGAAGTTGTGCAATACATGGCAGATTTTGTAGCCAAGAGGAATGCGAAATTTCTGGTACCAAAGAAGAAGAAGAGGGGGTTTTGGTTCTGGTTTTGCTCAATATTTTGCCCCCAACAGAGACGATTGTGA 1572 0.4218 MVPTKEQPSPAFLDTVEEITRIYRSLPLRPSIEEVEAATSAIETINSEEDMKLQEISMQQVPHDVPKQLFSLLQELKKTVVLFQSHELRKEALHLLQQEKMFQTLADLIQRASQFVSRDATDLEITNLAEPAGKIETDVYIGDDSLVKGKEDGEKPEKINLNVERKSSAKISFSADDGNSEKLSLMKVATVIENCANSGAAILELRGKLVDQMEWLPVSIGKLSHVCEIDLSENRIMALPSTFGDLKALTKLDLHANQLINLPHTFGELINLTDLDLRSNRLRSLPASFENLENLIDLELSSNEFTQLPDLIGNLRSLRRLNVETNELEELPYTVGNCSSLSELRLDFNQLKALPEAIGNLELLEILTLHYNRVKRLPTTMGNLSRLKELDASFNELEFVPENLCFTVSLKKLNVSNNFSDLRALPKSIGNLEMLEELDISDDQIKALPESFRFLSKLRVFRADQTPLEVPPREVVKLGAQEVVQYMADFVAKRNAKFLVPKKKKRGFWFWFCSIFCPQQRRL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0261 523 FunFam Plant intracellular Ras-group-related LRR protein 4 182 490 - -
Lele54g0261 523 ProSiteProfiles Leucine-rich repeat profile. 294 315 IPR001611 GO:0005515
Lele54g0261 523 SMART LRR_bac_2 292 311 - -
Lele54g0261 523 SMART LRR_bac_2 407 428 - -
Lele54g0261 523 SMART LRR_bac_2 361 380 - -
Lele54g0261 523 SMART LRR_bac_2 269 288 - -
Lele54g0261 523 SMART LRR_bac_2 384 403 - -
Lele54g0261 523 SMART LRR_bac_2 246 265 - -
Lele54g0261 523 SMART LRR_bac_2 338 357 - -
Lele54g0261 523 SMART LRR_bac_2 315 334 - -
Lele54g0261 523 SMART LRR_bac_2 432 451 - -
Lele54g0261 523 Gene3D Ribonuclease Inhibitor 176 494 IPR032675 -
Lele54g0261 523 Pfam Leucine rich repeat 271 328 IPR001611 GO:0005515
Lele54g0261 523 Pfam Leucine rich repeat 340 397 IPR001611 GO:0005515
Lele54g0261 523 SMART LRR_typ_2 246 268 IPR003591 -
Lele54g0261 523 SMART LRR_typ_2 361 383 IPR003591 -
Lele54g0261 523 SMART LRR_typ_2 223 245 IPR003591 -
Lele54g0261 523 SMART LRR_typ_2 339 360 IPR003591 -
Lele54g0261 523 SMART LRR_typ_2 315 338 IPR003591 -
Lele54g0261 523 SMART LRR_typ_2 384 407 IPR003591 -
Lele54g0261 523 SMART LRR_typ_2 292 314 IPR003591 -
Lele54g0261 523 SMART LRR_typ_2 432 454 IPR003591 -
Lele54g0261 523 SMART LRR_typ_2 269 291 IPR003591 -
Lele54g0261 523 ProSiteProfiles Leucine-rich repeat profile. 271 293 IPR001611 GO:0005515
Lele54g0261 523 SUPERFAMILY L domain-like 215 470 - -
Lele54g0261 523 SMART LRR_sd22_2 384 406 - -
Lele54g0261 523 SMART LRR_sd22_2 269 294 - -
Lele54g0261 523 SMART LRR_sd22_2 246 264 - -
Lele54g0261 523 PANTHER LEUCINE-RICH REPEAT-CONTAINING 295 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0261 Lele-ChrLele54 2206528 2208752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0261 216 447 Receptor kinase-like Gene Family AT3G11080 34.454 1.69e-23 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0261 54 2206528 2208752 Lele55g1229 55 18865478 18869055 hybridization
Lele54g0261 54 2206528 2208752 Lele56g1176 56 15222346 15224562 hybridization