Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0055 ATGATAAAAGCCGTATTGGTGATGAACACGCAGGGGAGGCCCCGTCTTGCAAAATTTTATGAATTTCGGCAGGAACTAATACGTAATGTGTTTTCAGTCTTGTGCAGTAGAGCTGAAAATGTTAGTAGTTTCGTGGATGCCGAGTCCATCTTTGGTCAGGATGCTCGACTTGTCTACAAGCACTATGCAACTTTGTACTTTGTGTTCATATTTGATAGTTCTGAAAATGAGCTGGCTGTGCTTGACTTAATACAAGTCTTTGTTGAAACACTGGACAAATGCTTCAGAAATGTTTGTGAACTTGATGTAGTGTTCAACTATAGCAAGATGCATTCTATTCTAGATGAGATTATCTTTGGAGGCCAGGTTTTGGAAACAAGTTCAACCGAGGTTATGAAGGCTATTGAAGAGTTGTCAAGGCTAGAAGCGAGCTCCAATGCTATCAACCTTGTATCAAAATCTGTTTCTGGTTGGAGGACGCGGTAG 486 0.4095 MIKAVLVMNTQGRPRLAKFYEFRQELIRNVFSVLCSRAENVSSFVDAESIFGQDARLVYKHYATLYFVFIFDSSENELAVLDLIQVFVETLDKCFRNVCELDVVFNYSKMHSILDEIIFGGQVLETSSTEVMKAIEELSRLEASSNAINLVSKSVSGWRTR 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0055 161 Gene3D - 1 155 - -
Lele54g0055 161 ProSitePatterns Clathrin adaptor complexes small chain signature. 57 67 IPR000804 GO:0006886|GO:0016192|GO:0030117
Lele54g0055 161 SUPERFAMILY SNARE-like 1 139 IPR011012 -
Lele54g0055 161 FunFam AP complex subunit sigma 1 151 - -
Lele54g0055 161 Coils Coil 124 144 - -
Lele54g0055 161 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 142 IPR016635 GO:0015031
Lele54g0055 161 PIRSF AP_complex_sigma 1 152 IPR016635 GO:0015031
Lele54g0055 161 Pfam Clathrin adaptor complex small chain 1 141 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0055 Lele-ChrLele54 464408 466709 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0055 54 464408 466709 Lele54g0055 54 464408 466709 ECH
Lele54g0055 54 464408 466709 Lele55g1443 55 20642719 20648606 hybridization
Lele54g0055 54 464408 466709 Lele56g1378 56 16897523 16902507 hybridization