Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0962 ATGCTGTGTCTGAAGTTAGTGCAGTCTCGTCTCTCGTGTGCCTTAAACAAGAAGGAAGATATGGCGGGGCAGTCATACGAGGAAGCCATTGCAGAGCTGAAGAAGCTTATCAGCGAGAAAGCTGACCTTGGGGGCGTCGCCGCCGCAAAGATCAAGCAGCTGACAGCCGAGTTGAGCGCCGCCGATTCGAAGCCGATTAACCCGGACGAGAGGATCCGAACCGGGTTCACTCACTTTAAGAAAGAGAAGTTCGAGAAGAATCCAGATTTGTTTGGGAAACTTGCCAATGGCCAGAGCCCAAAGTTTTTGGTATTTGGATGCTCAGACTCGAGAGTTTGCCCATCGCATGTACTGGATTTCCAACCGGGTGAGGCTTTTGTGGTGCGGAACATCGCCAACATGATCCCGCCTTATGACCAGACGAAATATTCAGGAACTGGGGCAGCCATTGAATATGCAGTGTTGCATTTAAAGGTGGAGAATATAGTGGTGATTGGACATAGCTGTTGTGGAGGTATAAAAGGGCTCATGGCTATACCAGATGATGGGACCACTTCAAGTGAATTCATAGAGAACTGGGTGCAAATTTGTAATCCAGCAAAATCCAAGGTTAAAGCAGACACAAAAAGCTTGAGTTTCTCGGAGCAGTGTACTAACTGTGAGAAGGAAGCAGTGAATGTGTCGCTTGCAAATCTGCTGAGCTATCCGTTTGTTAGAGATGGAGTTGTGAAGAAAACACTCGTATTAAAAGGTGCTCATTACGATTTTGTTAATGGCACCTTCGACCTCTGGGATCTGGACCTCAAAATCTCACCTCTTTAA 822 0.4708 MLCLKLVQSRLSCALNKKEDMAGQSYEEAIAELKKLISEKADLGGVAAAKIKQLTAELSAADSKPINPDERIRTGFTHFKKEKFEKNPDLFGKLANGQSPKFLVFGCSDSRVCPSHVLDFQPGEAFVVRNIANMIPPYDQTKYSGTGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMAIPDDGTTSSEFIENWVQICNPAKSKVKADTKSLSFSEQCTNCEKEAVNVSLANLLSYPFVRDGVVKKTLVLKGAHYDFVNGTFDLWDLDLKISPL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0962 273 SUPERFAMILY beta-carbonic anhydrase, cab 70 269 IPR036874 GO:0004089|GO:0008270
Lele53g0962 273 SMART Pro_CA_2 95 265 IPR001765 GO:0004089|GO:0008270
Lele53g0962 273 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 107 114 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lele53g0962 273 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 151 171 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lele53g0962 273 FunFam Carbonic anhydrase 57 273 - -
Lele53g0962 273 Pfam Carbonic anhydrase 103 260 IPR001765 GO:0004089|GO:0008270
Lele53g0962 273 CDD beta_CA_cladeB 75 264 IPR045066 GO:0004089|GO:0008270
Lele53g0962 273 Gene3D Carbonic anhydrase 59 272 IPR036874 GO:0004089|GO:0008270
Lele53g0962 273 PANTHER CARBONIC ANHYDRASE 50 267 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0962 Lele-ChrLele53 19206025 19210097 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1040 49 6667148 6676133 Lele53g0962 53 19206025 19210097 CCT
Lele50g1131 50 7455996 7457215 Lele53g0962 53 19206025 19210097 CCT
Lele51g1058 51 6787750 6792158 Lele53g0962 53 19206025 19210097 CCT
Lele53g0962 53 19206025 19210097 Lele55g0512 55 3269334 3274614 hybridization
Lele53g0962 53 19206025 19210097 Lele56g0498 56 3633640 3639483 hybridization