Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0684 ATGGCGGCAACCACACTCTACCGTTTCCCTTCAGCCGTGGCTTCTCTCTCCTCCTCTACAGACAAAAAATCGCCACCTATTCCCTCGCCCTACTGCAACTTTTTGAAGCCAATTTCTGTTTCTGGGCTAAAACCTCCTTCTATTAGAGTTTCCAACTGCAGTTTGAAATTTTCGGGTTCAACAGCGGTGGTCTCTTGTCGGGCTTTGAAGGTACGCGCGGTGGTGGATGGTGATTCTGCGACTGACCTGGAACCAGAATCAGATAATTCTGAAGCGGGTGCTAGAATTGACTTAAAGCTGCCAAGAAGAAGCATGCTTGTAGAATTTACATGCAACTTGTGTGGTGAAAGAACAAGGAGACTTGTAAACCGATTAGCCTATGAAAGGGGTGTCGTTTTTGTTCAGTGCGCAGGATGTCTTCAGCATCACAAATTAGTTGACAATCTTGGCCTCATTACAGAGTATGACTTCCGGGAGAAAACCAACACAGACTCAGAAATTGATAAAGTTTGA 513 0.4542 MAATTLYRFPSAVASLSSSTDKKSPPIPSPYCNFLKPISVSGLKPPSIRVSNCSLKFSGSTAVVSCRALKVRAVVDGDSATDLEPESDNSEAGARIDLKLPRRSMLVEFTCNLCGERTRRLVNRLAYERGVVFVQCAGCLQHHKLVDNLGLITEYDFREKTNTDSEIDKV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0684 170 ProSiteProfiles Zinc finger DNL-type profile. 100 170 IPR007853 GO:0008270
Lele53g0684 170 Pfam DNL zinc finger 107 159 IPR007853 GO:0008270
Lele53g0684 170 PANTHER UNCHARACTERIZED 11 162 IPR024158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0684 Lele-ChrLele53 16980034 16981947 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0684 53 16980034 16981947 Lele55g0803 55 5447825 5452206 hybridization
Lele53g0684 53 16980034 16981947 Lele56g0747 56 5643473 5644861 hybridization