Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0803 ATGGCGGCAACCACACCCTACCGTTTCCCTTCGGCCGTTGCTTCTCTCTCCTCCTCTACGGACAAAAAATGGCCGCCTATTCCCTCGCACTACTGCAACTTTTTGAAGCCAATTCCTGTTTCTGGGCGAAAACCTCCTTCTATTAGAGTTTTCAACTGCAGGTTGAAATTTTCGGGTTCAACAGCGGTGGTCTCTTGTCCAGCTTTGAAGGTAAGCGCGGTGGTGGATGGTGATTCTGCGACTGACCTGGAACCAGAATCAGATAATTCTGAAGCGGGTGCTAGAATTGACTTAAAGCTCCCAAGAAGAAGCATGCTTGTAGAATTTACATGCAACTTGTGTGGTGAAAGAACAAGGAGACTTGTAAACCGATTAGCCTATGAAAGGGGTGTCGTTTTTGTTCAGTGCGCAGGATATGAAGCCAGTGATGGCAAGCAAAACGGCAGTAGCAAGTCCTTTGTTGTACTTGCTGTATTTGTGGGTGGTGCTGGGGGACTCCGGATAGTCGTTGGTGCTAGCGCTGGACCAAGTGCCGGGGCTGGTGTCTCTGCCAATGGTGCTGGGGCTGGTGCTGGTGTGGCCATCAATGGTGAAGGAACAGGTGATGGTATCGGTGCTTTCTTTTTTGGCGCATGTGCTGGTGCTGGAGGTGTCTGGTCTGGTGTTGGGGCTATCGCTGGAGGTGGCAATGGTGTTGGTGAAGCAACTGGTGGTGGCAGTAGGGGAGTTGCTACAGGTGGAGCCTTTGGTGGTTGTGGTGGTGGAATCTTAGGAGATGGGGCTTTTGGGTTGATAGCTGGTGCAACCTTGGGTGCTGGGGGTTTTACAGGACCAGAAGTGGGAGTTGCTGTTGGTGATTTGCTCAAAGTAGAAGGGGTTGCTGCCACAGTTGGGGGTTTTGCAGCCACTAATGGTGCAGCAGCCAGGGAAGGCCTTGCAGCTGATACAGGGGCTTTTGCAGCCTCCAATGGTGCAGCAGACAAGGCAGGCCTTGCGGCCACGGCGGGGGCTTTTGCAGCCACTAGTGGTGCAGCAGAAGTGGTAGGTGTAGCAGCCACAACAGGAGGTTTTGCAGCCACTAATGGTGCAGCAGAGGAGGCAGGCCTTGTGGCCACAACGGGGGCTTTTGCAGCCACTAGTGGTGCAGCAGAAGTGGTAGGTGTAGTAGCCACAACAGGAGCTTTTGCAGCCACTACTGGTGCAGCAGAGGAGGCGGGCCTTGCGGCTGGCACTTTGGAGGTTGCAGCAGAAGAGGCAGGCGTTGCAGCTGGCACTTTGGAGGTTGCAGGTGGCTGGGTTGCTGCCACAACAGGGGCTTTTGCTGCTGCTACTGGCGCTGCAGAAGAGGCTGGCCTTGCAGCTGGCACTTTGGAGGTTGTAGGTGCCTGGGTTGCTGCTGGTGGTTTCCGAGAAGTGGATGGTGTTGCTGCCACAACAGGAGGTTTCATGGCTGCTACCGGTGCGCCGGAAGAGGCTGGCCTTGCAGCAGGAACACTAATCGGCAAGTTAGAAGGTGCTGTCGTTGTTTTGGTCGATAACTTTGAGGGTGTAGCTTGTGGTGCTTGGGCGTTGCTGGGGGCCAGAGGCCAGCAGAGGCAAGCCAAGGTCAATACCCAGAACATTGCAGCCATTGCTGGACGGATTTCACAAGACAAGAATACCAACTGGATTTTGAGGTTATATCTGTAA 1689 0.5411 MAATTPYRFPSAVASLSSSTDKKWPPIPSHYCNFLKPIPVSGRKPPSIRVFNCRLKFSGSTAVVSCPALKVSAVVDGDSATDLEPESDNSEAGARIDLKLPRRSMLVEFTCNLCGERTRRLVNRLAYERGVVFVQCAGYEASDGKQNGSSKSFVVLAVFVGGAGGLRIVVGASAGPSAGAGVSANGAGAGAGVAINGEGTGDGIGAFFFGACAGAGGVWSGVGAIAGGGNGVGEATGGGSRGVATGGAFGGCGGGILGDGAFGLIAGATLGAGGFTGPEVGVAVGDLLKVEGVAATVGGFAATNGAAAREGLAADTGAFAASNGAADKAGLAATAGAFAATSGAAEVVGVAATTGGFAATNGAAEEAGLVATTGAFAATSGAAEVVGVVATTGAFAATTGAAEEAGLAAGTLEVAAEEAGVAAGTLEVAGGWVAATTGAFAAATGAAEEAGLAAGTLEVVGAWVAAGGFREVDGVAATTGGFMAATGAPEEAGLAAGTLIGKLEGAVVVLVDNFEGVACGAWALLGARGQQRQAKVNTQNIAAIAGRISQDKNTNWILRLYL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0803 562 ProSiteProfiles Zinc finger DNL-type profile. 100 207 IPR007853 GO:0008270
Lele55g0803 562 Pfam DNL zinc finger 107 138 IPR007853 GO:0008270
Lele55g0803 562 PANTHER UNCHARACTERIZED 69 138 IPR024158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0803 Lele-ChrLele55 5447825 5452206 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0684 53 16980034 16981947 Lele55g0803 55 5447825 5452206 hybridization
Lele54g0690 54 13830603 13833946 Lele55g0803 55 5447825 5452206 hybridization