Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0747 ATGGCGGCAAGCACACCCTACCGTTTCCCTTCAGCCGTTGCTTCTCTCTCCTTCCCTACGGACAAAAAATCGCCACCAATTCCCTCGCACTACTGCAACTCTTTCAAGCCAATTTCTGTTTCTGGGCTAAAACCTCCTTCTATTAGAGTTTCCAACTGCAGGTTGAAATTTTCTGGTTCAACAGCGGTGGTCTCTCGTCGGGCTTTTAAGGTCCGCGCGGTGGTGGATGGTGATTCTGCGACTGACCCGGAACCAGAATCAGATAATTCTGAAGCGGGTGCATGTATTGACTTAAAGCTTCCAAGAAGAAGCATGCTTGTAGAATTTACATGCAGCTTGTGTGGTGAAAGAACAAGGAGACTTGTAAACCGAGTGGCCTATGAAAGGGGTGTAATTTTTGTTCAGTGCGCAGGATGTCTTCAGCATCACAAATTAGTTGACAATCTTGGCCTCATCACAGAGTATGACTTGCGGGAGAAAACCAACACAGACTCAGAAATTGATCAAGTTTGA 513 0.4639 MAASTPYRFPSAVASLSFPTDKKSPPIPSHYCNSFKPISVSGLKPPSIRVSNCRLKFSGSTAVVSRRAFKVRAVVDGDSATDPEPESDNSEAGACIDLKLPRRSMLVEFTCSLCGERTRRLVNRVAYERGVIFVQCAGCLQHHKLVDNLGLITEYDLREKTNTDSEIDQV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0747 170 Pfam DNL zinc finger 107 159 IPR007853 GO:0008270
Lele56g0747 170 PANTHER UNCHARACTERIZED 64 162 IPR024158 -
Lele56g0747 170 ProSiteProfiles Zinc finger DNL-type profile. 100 170 IPR007853 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0747 Lele-ChrLele56 5643473 5644861 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0684 53 16980034 16981947 Lele56g0747 56 5643473 5644861 hybridization
Lele54g0690 54 13830603 13833946 Lele56g0747 56 5643473 5644861 hybridization