Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0652 ATGCGTTTTTTTCAGTGGCTCTCTAACTTGGCAAAAATGGTGTCAGCTTCTCCTCCTTCCAAGGAAGTTAATGCAAACGGAAAATGCACAGAAAATGGACCTTCCCGAAATGCCAAATGGTGGTATTCAACCTTCCACACCGTCACGGCCATGATAGGCGCCGGAGTTCTAGGCCTACCTTATGCCATGGCTTATTTGGGATGGGGACCAGGTACGCTGTTGTTGTTGTTATCTTGGTGTCTGACCTTGAATACAATGTGGCAAATGATCCAACTCCACGAGTGTGTTCCGGGGACCCGGTTCGACCACTATATTGATCTGGGTCGGCATGCTTTCGGGCCAAAGCTCGGACCTTGGATTGTTCTGCCTCAGCAGTTAATTGTCCAAGTTGGGTGTGATATTGTGTATATGGTCACTGGTGGGCAATGTCTCAAGAAGTTCATGGAAATAGCTTGCACGAATTGCACACAGATCAAACAATCTTACTGGATTCTCATCTTCGGGGGAATCCATTTCTTCCTCTCTCAGCTTCCCAATTTCAACTCTGTTGCTGGTGTTTCATTAGCAGCCGCTATTATGTCTCTATGCTATTCGACAATCTCGTGGGTGGCATGCTTGACGAGAGGTCCGATAGAGAATGTGAGCTACGCGTACAAGAAGACAAGCTCAACAGATTTGATGTTCAGGGTGTTCAATGCATTTGGTGAGATCTCATTTGCATTTGCAGGCCATGCAGTGGCCCTTGAAATTCAGGCCACAATCCCTTCAACACCTGAGAAGCCCTCAAAAGTACCCATGTGGAAGGGTGCCTTAGGCGCCTATTTCGTTAATGCTATATGCTATTTCCCAGTAGCCCTTATAGGGTACTGGACTTTTGGGAACGCCGTCGAAGATAATATCCTTATGTCTCTTGAAAAGCCTGCTTGGCTCATTGCCTCTGCAAATTTGATGGTCTTTGTTCATGTCGTTGGTAGTTACCAGGTTTATGCTATGCCTGTGTTTGATCTGATAGAGAGGATGATGATCAAGAGAATGAACTTTCAGCAAGGATTAACACTCAGACTTATTGCTCGAACTTCTTACGTAGCTTTTACATTGTTCGTTGGGGTGACCTTCCCTTTCTTTGGTGATCTCCTTGGGTTTTTTGGAGGATTTGGTTTTACTCCCACCTCCTATTTTCTTCCAAGCATAATATGGCTCATAATCAAGAAGCCCAGGAGATTCAGCATCAACTGGTTCATCAATTGGGCCTCAATATTGGTAGGAGTGAGCATTATGTTGGCATCCACAATCGGTGGCTTAAGGAATATTGTTGCTGATTCCTACACATATAAGAGGCGACGGAGAAAGCCAGAGCTGGAGACTGTGAAGTCTGTGACATGCGGGAGATTAGCTCTCTCGCCTAACCGCATATTCAATCCAAAGCCTAGGGACAAACATTCTCTTTGCAAAGGACCATTCTCCAATCTTTGCGTTCCCATGGCTGCATTAGCAACAGGTAAAGGAGGAGGACTACTAGAGAGACCGGTTATTGAAAAAGGCACTCCTGGTCGTGAGTCTGAGTTTGATTTGAGGAAATCAAGGAAAACAGCACCACCATACCGAGTGATTCTGCACAATGACGACGTCAATAGACATGACTATGTTGTTCAAGTACTGATGAAGGTTATTCCTGGGATGACCCGTGATGATGCATATGACATTATGCTAGAAGCTCACTACAATGGGAAGTCAGTGTTCAATCGAACCTGCAAGGGGTGGCTGCTGCTAAAAGGTAAAATTTTTCAGTAG 1791 0.4534 MRFFQWLSNLAKMVSASPPSKEVNANGKCTENGPSRNAKWWYSTFHTVTAMIGAGVLGLPYAMAYLGWGPGTLLLLLSWCLTLNTMWQMIQLHECVPGTRFDHYIDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGQCLKKFMEIACTNCTQIKQSYWILIFGGIHFFLSQLPNFNSVAGVSLAAAIMSLCYSTISWVACLTRGPIENVSYAYKKTSSTDLMFRVFNAFGEISFAFAGHAVALEIQATIPSTPEKPSKVPMWKGALGAYFVNAICYFPVALIGYWTFGNAVEDNILMSLEKPAWLIASANLMVFVHVVGSYQVYAMPVFDLIERMMIKRMNFQQGLTLRLIARTSYVAFTLFVGVTFPFFGDLLGFFGGFGFTPTSYFLPSIIWLIIKKPRRFSINWFINWASILVGVSIMLASTIGGLRNIVADSYTYKRRRRKPELETVKSVTCGRLALSPNRIFNPKPRDKHSLCKGPFSNLCVPMAALATGKGGGLLERPVIEKGTPGRESEFDLRKSRKTAPPYRVILHNDDVNRHDYVVQVLMKVIPGMTRDDAYDIMLEAHYNGKSVFNRTCKGWLLLKGKIFQ 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0652 596 PANTHER OS05G0424000 PROTEIN-RELATED 38 433 - -
Lele53g0652 596 SUPERFAMILY ClpS-like 528 580 IPR014719 -
Lele53g0652 596 Gene3D - 512 585 IPR014719 -
Lele53g0652 596 FunFam Lysine histidine transporter 1 33 443 - -
Lele53g0652 596 Pfam ATP-dependent Clp protease adaptor protein ClpS 530 579 IPR003769 GO:0030163
Lele53g0652 596 Pfam Transmembrane amino acid transporter protein 37 432 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0652 Lele-ChrLele53 16672008 16680713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0652 28 445 Organic Solute Cotransporters AT1G25530 76.794 0.0 655
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0652 53 16672008 16680713 Lele55g0837 55 5765400 5767255 hybridization
Lele53g0652 53 16672008 16680713 Lele56g0778 56 5931681 5939776 hybridization