Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0837 ATGATTTCCCTAGATAGTTTTTTTAGAACTCAGATTCATTTGAGACCAACTCCTTTAGAAGTTTTTAATGGGGACAAACATTCTCTTTGCAAAGGACCATTCTCCAATCTTTGCGTTCCCACAGCTGCATTAGCAACAGGTAAAGGAGGAGGACTACTGGAGAGACCGGTTATTGAAAAGGGCACTTCTGGTCGTGAGTCTGAGTTTGATTTGAGGAAATCACGGAAAACAGCACCACCATACCGAGTGATTCTGCACAATGACGACATCAATAGACATGACTATGTTGTTCAAGTACTGATGAAGGTTATTCCTGGGATGACCCGTGATGATGCATATGACATTATGCTAGAAGCTCACTACAATGGGAAGTCAGTGGTGATTATCTGTGCCCAAGCTGTTGCTGAAGTACACTGCTCGCAACTAAGAGGCAACGGCCTATTCAGTTCAATCGAACCTGCAAGTGGTGGCTGCTGCTAA 480 0.4375 MISLDSFFRTQIHLRPTPLEVFNGDKHSLCKGPFSNLCVPTAALATGKGGGLLERPVIEKGTSGRESEFDLRKSRKTAPPYRVILHNDDINRHDYVVQVLMKVIPGMTRDDAYDIMLEAHYNGKSVVIICAQAVAEVHCSQLRGNGLFSSIEPASGGCC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0837 159 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 75 153 - -
Lele55g0837 159 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 144 IPR003769 GO:0030163
Lele55g0837 159 Gene3D - 59 155 IPR014719 -
Lele55g0837 159 SUPERFAMILY ClpS-like 75 153 IPR014719 -
Lele55g0837 159 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 36 158 IPR022935 GO:0006508
Lele55g0837 159 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 66 155 IPR022935 GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0837 Lele-ChrLele55 5765400 5767255 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0652 53 16672008 16680713 Lele55g0837 55 5765400 5767255 hybridization
Lele54g0662 54 13542658 13543457 Lele55g0837 55 5765400 5767255 hybridization