Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0778 ATGGTGTCAGCTTCTTCTCCTCCTTCCTCCAAGGTGATTCTGTGTATAGAAGTTAATTCAAACGGAAAGTGTACAGAAAATGGACCTTCCCGAAATGCCAAATGGTGGTATTCGACCTTCCACACCGTCACGGCCATGATAGGCGCCGGAGTTCTAGGCCTACCTTATGCCATGGCTTATTTGGGATGGGGACCAGGTACGCTGTTGTTGCTGTTATCTTGGTGTCTGACCTTGAATACGATGTGGCAAATGATCCAACTCCATGAGTGTGTTCCGGGGACCCGGTTCGACCGCTATATTGATCTGGGTCGACATGCTTTCGGACCCAAGCTCGGACCTTGGGTTGTGCTACCTCAGCAGTTAATTGTCCAAGTTGGGTGTGATATTGTGTATATGGTCACTGGTGGGCAATGTCTCAAGAAGTTCATGGAAATAGCTTGCACGAATTGCACACAGATAAAACAATCTTACTGGATTCTCATCTTCGGTGGCATCCATTTCTTCCTCTCTCAGCTTCCCAATTTCAACTCTGTTGCTGGTGTTTCATTAGCAGCCGCTATTATGTCCCTCTGCTATTCAACGATATCGTGGGTGGCGTGCTTGGCGAGAGGTCCAATAGAGAACGTGAGCTACGCGTACAAGAAGACGAGCTCAACAGATTTGATGTTCAGGGTGTTCAATGCATTTGGTGAGATCTCATTTGCATTTGCAGGCCATGCAGTGGCCCTTGAAATTCAGGCCACAATCCCTTCAACGCCTGAGAAGCCCTCAAAAGTACCCATGTGGAAGGGTGCCTTAGGTGCCTATTTCGTTAATGCTATATGCTATTTCCCAGTAGCCCTTATAGGGTACTGGACTTTTGGGAACGCCGTCGAAGACAATATCCTCATGTCTCTTGAAAAGCCTGCTTGGCTCATTGCCTCTGCAAATTTGATGGTCTTTGTTCATGTCGTTGGTAGTTACCAGGTTTATGCTATGCCTGTGTTTGGTCTGATAGAGAGGATGATGATCAACAGAATGAACTTTCAGCAAGGATTAACACTCAGACTTATTGCTCGAACTAGTTATGTAGCTTTTACATTGTTCGTTGGGGTGACCTTCCCTTTCTTTGGCGATCTTCTTGGGTTTTTTGGAGGATTTGGTTTTACTCCGACTTCCTATTTTCTTCCAAGCATAATATGGCTCATAATCAAGAAGCCAAGGAGATTCAGCATCAACTGGTTCATCAATTGGGCTTCAATATTGGTAGGAGTGAGCATAATGTTGGCATCCACAATCGGTGGCCTCAGGAATATTGTTGCAGATGCCTACACATATATGTGTATTTTGTTGTTCATCACTCTCTTGCACAGATCCAAATCCAAAAGAAGCTCGGAAACACAAAACAGAGGGCGACGTAGAGAGCCAGAGAGGGAGACTGTAAAGTATGTGATATGCGGAAGATTAGCTCTCTCGCCCAAACAGGTCTTTAACCCAAAGCCTGGGGACAAACATTCTCTTTGCGAAGGACCATTCTCCAATCTTTGCATTCCCATGGCTGCGTTAGCAACAGGTAAAGGAGGAGGACTACTGGATAGACCGGTTATTGAAAAAGGCACTCCTGGTCGTGAGTCTGAGTTTTATTTGAGGAAATCACGGAAAACAGCACCACCATACTGA 1659 0.4575 MVSASSPPSSKVILCIEVNSNGKCTENGPSRNAKWWYSTFHTVTAMIGAGVLGLPYAMAYLGWGPGTLLLLLSWCLTLNTMWQMIQLHECVPGTRFDRYIDLGRHAFGPKLGPWVVLPQQLIVQVGCDIVYMVTGGQCLKKFMEIACTNCTQIKQSYWILIFGGIHFFLSQLPNFNSVAGVSLAAAIMSLCYSTISWVACLARGPIENVSYAYKKTSSTDLMFRVFNAFGEISFAFAGHAVALEIQATIPSTPEKPSKVPMWKGALGAYFVNAICYFPVALIGYWTFGNAVEDNILMSLEKPAWLIASANLMVFVHVVGSYQVYAMPVFGLIERMMINRMNFQQGLTLRLIARTSYVAFTLFVGVTFPFFGDLLGFFGGFGFTPTSYFLPSIIWLIIKKPRRFSINWFINWASILVGVSIMLASTIGGLRNIVADAYTYMCILLFITLLHRSKSKRSSETQNRGRRREPERETVKYVICGRLALSPKQVFNPKPGDKHSLCEGPFSNLCIPMAALATGKGGGLLDRPVIEKGTPGRESEFYLRKSRKTAPPY 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0778 552 Pfam Transmembrane amino acid transporter protein 32 427 IPR013057 -
Lele56g0778 552 PANTHER OS05G0424000 PROTEIN-RELATED 33 428 - -
Lele56g0778 552 FunFam Lysine histidine transporter 1 28 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0778 Lele-ChrLele56 5931681 5939776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele56g0778 17 439 Organic Solute Cotransporters AT1G25530 76.123 0.0 657
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0652 53 16672008 16680713 Lele56g0778 56 5931681 5939776 hybridization
Lele54g0662 54 13542658 13543457 Lele56g0778 56 5931681 5939776 hybridization