Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0257 ATGGCAGACAGAACATTGTTCAAAGAGCATGACAATTCTTCTGGTTGCTTGCGCGCGCGCGCGCGTCTAGGTCAGAGCGCACTTCGTAAAACCAGCCCCTTACCTTACCTTACCTCTTTGCTCCATCCTCTCCACCTTGCTCGAGGCGTGGCAGAGAAAATCATAGCCAAGGCCATGGCGCCTACGAAGGACCCACCATCACCGGCCTTTCTTGACACCGTTGAAGAGATTACGAGAATTTACCGATCGCTTCCTCTTCGACCTTCGATTGAAGAAGTCGAAGCTGCTACTTCTGCTATCGAAACTATCAATAGTGAGGAGAATATCAAGCTCCAGGAAATCTCAATGCAGCAAGTCCCCCACGGTGTCCCCGAGCAGCTTTTCTCTCTGTTACAAGAATTGAAGAAGACCGTTGTCTTGTTCCAGAGCCATGAACAGAGGAGAGAAGCTCTCCACCTTCTTAAACAAGAGAAGATGTTTCAAACCCTTGCTGATCTTATTCAGAGGGCTTCTCAATTCGTTTCTGGGGACGCTAAGGAACCGGAAGTGCGCAATTTAGCCGAACCGGCGGGGCAAATCGAGACAGATGTCGGTATCGGTGATGGCAATCTCATGAAGGTAAAGGAAGACGGAGAAAAACCGGAGAAAATCAATCTCGACTTTGAAAGAAGATCCTCCGCGAAGATATCTATCTCTTCTGATGATGGAAACTCGGAGAAATTAAGTCTCATGAAAGTTGCCACGGTTATTGAAAATTGTGCTAATAGTGGAGCAGAAATCCTTGAGCTTAGAGGGAAACTCGTGGACCAGATGGAATGGTTGCCTGTTTCAATTGGGAAACTCTCTCATGTCTGTGAAATGGACCTATCTGAGAACAGAATCATGGCTCTTCCTTCCACCTTTGGAGATCTCAAGGCCTTAACAAAGCTTGATCTTCATGCCAACCAGCTTATAAACCTTCCACACACTTTTGGGGAATTGATCAACCTCACTGATCTTGACCTCCGCGGCAATAGATTGAGATCACTACCAGCTTCTTTCGAAAAGTTGGAGAATCTCGTTGATCTTGACCTGAGTTCAAATGAGTTCACACAATTACCTGATTTGATTGGGAATTTAAGAAGCTTGAGGAGATTAAATGTTGAGACAAATGAACTTGAGGAGCTACCTTATACAATTGGAAATTGCTCGTCACTCTCAGAGTTGAGATTAGATTTTAATCAGCTCAAAGCCCTTCCTGAGGCAATTGGGAATCTTGAGCTCGTAGAGATTTTAACTCTGCACTATAACAGAGTTAAAAGGCTGCCTACTACAATGGGGAACATGAACAGATTGAAGGAACTTGATGCAAGCTTTAATGAACTGGAATTTGTACCAGAGAACCTATGTTTTGCTGTGAGTCTGAAGAAATTAAATGTGTCGAATAACTTCACAGACCTAAGAGCCTTGCCAAAATCAATTGGGAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGATGATCAAATAAAAGGATTACCAGAGTCTTTCAGGTTCTTGTCCAAATTGAGAGTTTTCCGTGCTGATCAGACTCCTCTTGAGGTACCTCCCAGAGAAGTGGTCAAGTTGGGTGCTCAGGAAGTTGTGCAGTACATGGCCGATTTTGTAGCCAAGAGGGAAGCGAAATTTCTGGTACCAAAGAAGAAGAAGAGGGGGTTTTGGTTATGGTTTTGCTCAGTATTTTGCCCCCAACAGAGACGATTTGATTTCTAG 1752 0.4435 MADRTLFKEHDNSSGCLRARARLGQSALRKTSPLPYLTSLLHPLHLARGVAEKIIAKAMAPTKDPPSPAFLDTVEEITRIYRSLPLRPSIEEVEAATSAIETINSEENIKLQEISMQQVPHGVPEQLFSLLQELKKTVVLFQSHEQRREALHLLKQEKMFQTLADLIQRASQFVSGDAKEPEVRNLAEPAGQIETDVGIGDGNLMKVKEDGEKPEKINLDFERRSSAKISISSDDGNSEKLSLMKVATVIENCANSGAEILELRGKLVDQMEWLPVSIGKLSHVCEMDLSENRIMALPSTFGDLKALTKLDLHANQLINLPHTFGELINLTDLDLRGNRLRSLPASFEKLENLVDLDLSSNEFTQLPDLIGNLRSLRRLNVETNELEELPYTIGNCSSLSELRLDFNQLKALPEAIGNLELVEILTLHYNRVKRLPTTMGNMNRLKELDASFNELEFVPENLCFAVSLKKLNVSNNFTDLRALPKSIGNLEMLEELDISDDQIKGLPESFRFLSKLRVFRADQTPLEVPPREVVKLGAQEVVQYMADFVAKREAKFLVPKKKKRGFWLWFCSVFCPQQRRFDF 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0257 583 ProSiteProfiles Leucine-rich repeat profile. 352 373 IPR001611 GO:0005515
Lele53g0257 583 FunFam Plant intracellular Ras-group-related LRR protein 4 240 548 - -
Lele53g0257 583 Pfam Leucine rich repeat 329 386 IPR001611 GO:0005515
Lele53g0257 583 ProSiteProfiles Leucine-rich repeat profile. 329 351 IPR001611 GO:0005515
Lele53g0257 583 SUPERFAMILY L domain-like 261 527 - -
Lele53g0257 583 Gene3D Ribonuclease Inhibitor 231 552 IPR032675 -
Lele53g0257 583 SMART LRR_typ_2 350 372 IPR003591 -
Lele53g0257 583 SMART LRR_typ_2 397 419 IPR003591 -
Lele53g0257 583 SMART LRR_typ_2 304 326 IPR003591 -
Lele53g0257 583 SMART LRR_typ_2 442 465 IPR003591 -
Lele53g0257 583 SMART LRR_typ_2 281 303 IPR003591 -
Lele53g0257 583 SMART LRR_typ_2 327 349 IPR003591 -
Lele53g0257 583 SMART LRR_typ_2 373 396 IPR003591 -
Lele53g0257 583 SMART LRR_typ_2 490 512 IPR003591 -
Lele53g0257 583 SMART LRR_bac_2 350 369 - -
Lele53g0257 583 SMART LRR_bac_2 396 415 - -
Lele53g0257 583 SMART LRR_bac_2 490 509 - -
Lele53g0257 583 SMART LRR_bac_2 304 323 - -
Lele53g0257 583 SMART LRR_bac_2 327 346 - -
Lele53g0257 583 SMART LRR_bac_2 442 461 - -
Lele53g0257 583 SMART LRR_bac_2 373 392 - -
Lele53g0257 583 SMART LRR_bac_2 465 486 - -
Lele53g0257 583 PANTHER LEUCINE-RICH REPEAT-CONTAINING 352 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0257 Lele-ChrLele53 2136412 2140272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0257 373 527 Receptor kinase-like Gene Family AT3G11080 34.783 2.17e-13 71.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0257 53 2136412 2140272 Lele55g1229 55 18865478 18869055 hybridization
Lele53g0257 53 2136412 2140272 Lele56g1176 56 15222346 15224562 hybridization