Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1665 ATGGCGGATGCGTTCTCAGGGATTCCTGCTGCAGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGAATAGTGAAGCAGCTTGCTGCTAATTCAGAAACTGATAAAATAACGGCTTTGATCAACATGTTGACTACGGAATACACTGGTTCGGTACAAGCAAATCACCGAAAGGGAGGATTGATAGGATTAGCTGCTGCAACTGTTGGCTTGTCTACTGAAGCATCTCGGTATCTTGAGCAAATTGTCCCCCCTGTGTTAGGTGCTTTTGCTGATCCAGACAGTAGAGTTCGTTATTATGCTTGTGAAGCACTGTATAATATTGCTAAGGTTGTAAGAGGGGAATTTATTGTATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTTAGATCCAAGTGTACAAAGTGCTGCTCATCTCCTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCATTGTTGAGGGAGCGTATGAATGTCTTGAATCCTTATGTTCGTCAATTTTTGGTTGGATGGATTACTGTATTGGATAGTGTCCCTGATATTGACATGCTGGGTTTTCTTCCTGATTTTCTTGACGGTTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATCCGTCAGCAAGCTGATTCAGCTCTTAGTGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATACTGATACAGAGGGCAGGTTCTCCGGATGAATTTACTAGATTAACAGCTATCACATGGATAAATGAGTTTGTTAAGCTTGGTGGCGACCAACTTTTTCCATATTATGCTGATATTCTTGGAGCCATTTTGCCTTGTGTATCTGATCAAGAAGAGAAAATTAGAGCTGTTGCTCGTGAAACCAATGAAGAGCTACGTACAATCAAGGCTGATCCAGCTGAATCGTTTGATGTAGGAGCTGTTCTCTCTATTGCTAGGAGGCAACTATCTAGTGAATGGGAGGCTACCCGGATCGAAGCTTTGCATTGGATATCAACCCTTCTAAACAGACACCGTGCTGAGGTTTTAAAATTTCTGAATGACATATTTGACACCCTACTGAAAGCACTGTCTGATCCATCTGATGAGGTTGTACTTCTAGTTCTTGAAGTGCATGCATGCATTGCTAAAGATCCTCAGCATTTCCATCAGCTTGTTGTTTTCCTAGTCCACAAGTTCCGTGTGGATAATTCTCTCTTAGAGAAGCGTGGTGCTTTGATAATTCGTCGACTTTGTGTGCTTTTAGATGCTGAAAGAGTCTACCGGGAACTATCTACAATACTTGAAGGAGAATCTGATCTAGATTTTGCATCGGTTATGGTTCAGGCTTTGAATTTGATCTTACTCACATCGTCAGAATTATCTGAGCTTCGAGCTCTTTTGAAGCAATTAGTGGTAAATCCTGCTGGGAAGGACTTGTATGTTTCTTTATATGCTTCATGGTGCCATTCTCCAATGGCAATTATAAGTCTCAGCTTCTTAGCTCAGACCTACCAACATGCTAGTGCTGTGATTCAATCTCTAGTTAAGGAGGATATTAATGTCAAATTCTTGGTCGAACTGGATAAGCTAATTCGCTTGCTGGAAACTCCAATCTTTGCCTATCTAAGATTGCAGCTTCTTGAACCTGGAAGATATATATGGTTATTTAAGGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCATTTAAGATTCTAAAAACCCGTCTTAAAGCTGTGCCACCGTATTCTTTAAACGGCGAGCAATTTAGGAGAACATCCTCAGGGAATCCCTACCAAATTCTTCATGGATCTCAAATCACTGAGGATGGGGACATAGTTGTGGATGTTGGCAACTCAGATAATGGAATCAATTTTGCTGCAAGGCTACAACAGTTTGAGCAAACGCAGAACCAGCATCGCATGCATGCTAGTGCTCAGGCACAGTTGCGCAATACTTCCACTTCTGTGTCAAAGAATCATATGGAGGACGAGCAGAAAGTGGAAGAATCAAGGCAACGTGTGTCAGATGTTCGTGCTTCTTCTCCAAGATCATAA 2142 0.416 MADAFSGIPAAVLRNLADKLYEKRKNAALEVEGIVKQLAANSETDKITALINMLTTEYTGSVQANHRKGGLIGLAAATVGLSTEASRYLEQIVPPVLGAFADPDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADLDPSVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILIQRAGSPDEFTRLTAITWINEFVKLGGDQLFPYYADILGAILPCVSDQEEKIRAVARETNEELRTIKADPAESFDVGAVLSIARRQLSSEWEATRIEALHWISTLLNRHRAEVLKFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAKDPQHFHQLVVFLVHKFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGESDLDFASVMVQALNLILLTSSELSELRALLKQLVVNPAGKDLYVSLYASWCHSPMAIISLSFLAQTYQHASAVIQSLVKEDINVKFLVELDKLIRLLETPIFAYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPPYSLNGEQFRRTSSGNPYQILHGSQITEDGDIVVDVGNSDNGINFAARLQQFEQTQNQHRMHASAQAQLRNTSTSVSKNHMEDEQKVEESRQRVSDVRASSPRS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1665 713 MobiDBLite consensus disorder prediction 663 713 - -
Lele52g1665 713 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Lele52g1665 713 FunFam protein VAC14 homolog 126 248 - -
Lele52g1665 713 PANTHER TAX1 BINDING PROTEIN-RELATED 8 691 IPR026825 GO:0006661|GO:0070772
Lele52g1665 713 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Lele52g1665 713 FunFam ARM repeat superfamily protein 5 125 - -
Lele52g1665 713 SUPERFAMILY ARM repeat 4 533 IPR016024 -
Lele52g1665 713 MobiDBLite consensus disorder prediction 663 685 - -
Lele52g1665 713 MobiDBLite consensus disorder prediction 686 707 - -
Lele52g1665 713 Gene3D - 256 479 IPR011989 -
Lele52g1665 713 FunFam protein VAC14 homolog isoform X1 249 410 - -
Lele52g1665 713 Gene3D - 2 252 IPR011989 -
Lele52g1665 713 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1665 Lele-ChrLele52 20297854 20307610 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1665 52 20297854 20307610 Lele52g1665 52 20297854 20307610 ECH
Lele49g1134 49 7509509 7520892 Lele52g1665 52 20297854 20307610 hybridization
Lele50g1705 50 21890340 21904653 Lele52g1665 52 20297854 20307610 hybridization