Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1134 ATGGCGGATGCGTCCTCAGTGATTCCTGCTGCAGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGAATAGTGAAGCAGCTTGCTGCTAATTCAGAAACTGATAAAATAACGGCTGTGATCAATATGTTGACTACGGAATATACTGGTTCGGTACAAGCAAATCACCGCAAGGGAGGATTGCTAGGATTAGCTGCTGCAACTGTTGGGTTGTCTACTGAAGCATCTCGGTATCTTGAGCAAATTGTCGCCCCCGTGTTAGGTGCTTTTGCTGATCCAGACAGTAAAGTTCGTTATTATGCTTGTGAAGCACTGTATAATATTGCTAAGGTTGTAAGAGGGGAATTTATTGTATTCTTCAATAAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGATTCAGATACAAGTGTACAAAGTGCTGCTCATCTCCTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAGTTTATACCATTGTTGAGGGAGCGTATGAATATCTTGAATCCATATGTTCGTCAATTTTTGGTTGGATGGATTACTGTATTGGATAGTGTCCCTGATATTGACATGCTGGGTTTTCTTCCTGATTTTCTTGACGGTTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATCCGTCAGCAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGTTCTCCAGATGAGTTTACTAGATTAACAGCTATCACATGGATAAATGAGTTTGTTAAGCTTGGTGGCGACCAACTTTTTCCATATTATGCTGATATTCTTGGAGCCATTTTGCCTTGTGTATCTGATCAAGAAGAGAAAATTAGAGCTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCAATCAAGGCTGATCCAGCTGAATCGTTCGATGTAGGAGCTGTTCTCTCCGTTGCTAGGAGGCAACTATCTAGTGAATGGGAGGCTACCCGGATTGAAGCTTTGCATTGGATATCAACCCTTTTAAACAGATACGGTGCTGAGGTTTTAACATTTCTGAATGACATATTTGACAACCTACTGAAAGCACTTTCTGACCCATCTGATGAGGTTGTACTTCTAGTTCTTGAAGTTCATGCATGCATTGCTAAAGATCCTCAGCACTTCCGACATTTTCTTGTTTTCCTAGTCCACAATTTCCGTGTGGATAATTCCCTTTTAGAGAAGCGAGGTGCTTTGATAATTCGTCGACTTTGTGTGCTTTTAGATGCTAAAAGAGTCTACCTGGAACTATCTACAATACTTGAAGGGGAATCTGATCTAGATTTTGCATCAGTTATGGTTCAGGCTTTGAATTTGATCTTACTCACATCGTCAGAATTATCTGAGCTTCGAGCTCTTTTGAAGCAATTAGTGGCAAATCCTGCAGGGAAGGACTTGTATGTTTCTTTGTATGCTTCATGGTGCCATTCTCCAATGGCAATTATAAGTCTCTGCTTCTTAGCTCAGACCTACCAACATGCTAGTGCTGTGATTCAGTCTCTAGTTAAGGAGGATATTAATGTCAAATTCTTGGTCGAACTGGATAAGCTAATTCGCTTGCTGGAAACCCCAATCTTTGCCTCTCTAAGATTGCAGCTTCTTGAACCTGGAAGATATATATGGTTATTTAAGGCATTATATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTTAAGATTCTAAAAACCCGTCTTAAAGCTGTGCCACCATATTCTTTAAACCATGAGCAATTTAGGAGAACATCCTCAGGGAATCCCTACCAAATTATTCACCACATGACCGGTGGATCTCAAATCATTGAGGATAGGGACACAGATGTGGATGTTGGCACCTCAGATAATGGAATCAACTTTGCTGATAGGCTAAAACAGTTTGAGCAAATGCAGAACCAGCATCACATGCATGCTAGAGCTCAGGCCCAGTTGCGCAATACTTCCACTTCTGTGTCAAAGAATCATATGGAGGACGCACAGAAACTGGGAGAATCAAGTCAACGTCTGTCAGATGTTCGTGTTTCTTCTCCAAGATCATAA 2154 0.4146 MADASSVIPAAVLRNLADKLYEKRKNAALEVEGIVKQLAANSETDKITAVINMLTTEYTGSVQANHRKGGLLGLAAATVGLSTEASRYLEQIVAPVLGAFADPDSKVRYYACEALYNIAKVVRGEFIVFFNKIFDALCKLSADSDTSVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNILNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLFPYYADILGAILPCVSDQEEKIRAVARETNEELRAIKADPAESFDVGAVLSVARRQLSSEWEATRIEALHWISTLLNRYGAEVLTFLNDIFDNLLKALSDPSDEVVLLVLEVHACIAKDPQHFRHFLVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAKRVYLELSTILEGESDLDFASVMVQALNLILLTSSELSELRALLKQLVANPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVKEDINVKFLVELDKLIRLLETPIFASLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPPYSLNHEQFRRTSSGNPYQIIHHMTGGSQIIEDRDTDVDVGTSDNGINFADRLKQFEQMQNQHHMHARAQAQLRNTSTSVSKNHMEDAQKLGESSQRLSDVRVSSPRS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1134 717 Gene3D - 250 411 IPR011989 -
Lele49g1134 717 SUPERFAMILY ARM repeat 10 535 IPR016024 -
Lele49g1134 717 MobiDBLite consensus disorder prediction 671 694 - -
Lele49g1134 717 FunFam protein VAC14 homolog isoform X1 251 410 - -
Lele49g1134 717 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Lele49g1134 717 MobiDBLite consensus disorder prediction 703 717 - -
Lele49g1134 717 Gene3D - 1 249 IPR011989 -
Lele49g1134 717 MobiDBLite consensus disorder prediction 671 717 - -
Lele49g1134 717 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Lele49g1134 717 PANTHER TAX1 BINDING PROTEIN-RELATED 7 695 IPR026825 GO:0006661|GO:0070772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1134 Lele-ChrLele49 7509509 7520892 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1134 49 7509509 7520892 Lele49g1134 49 7509509 7520892 ECH
Lele49g1134 49 7509509 7520892 Lele51g1154 51 7614122 7623090 hybridization
Lele49g1134 49 7509509 7520892 Lele52g1665 52 20297854 20307610 hybridization