Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1705 ATGGCAGATGCGTTCTCAGTGATTCCTGCTGCAGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGAATAGTGAAGCAGCTTGCTGCTAATTCAGAAACTGATAAAATAACGGCTGTGATCAGCATGTTGACTACGGAATACACTTGTTCGGTACAAGCAAATCACCGAAAGGGAGGATTGATAGGATTAGCTGCTGCAACTGTTGGCTTGTCTACTGAAGCATCTCGGTACCTTGAGCAAATTGTCCCCCCTGTTTTAGGTGCTTTTGCTGATCCAGACAGTAGAGTTCGTTATTATGCTTGTGAAGCACTGTATAATATTGCTAAGGTTGTAAGAGGGGAATTTATTGTATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGATCCAAGTGTACAAAGTGCTGCTCATCTCCTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCATTGTTGAGGGAGCGTATGAATGTCTTGAATCCTTATGTTCGTCAATTTTTGGTTGGATGGATTACTGTATTGGATAGTGTCCCTGATATTGACATGCTGGGTTTTCTTCCTGATTTTCTTGACGGTTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATCCGTCAGCAAGCTGATTCAGCTCTTTGTGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATACTGATACAGAGGGCAGGTTCTCCGGATGAGTTTACTAGATTAACAGCTATCACATGGATAAATGAGTTTGTTAAGCTTGGTGGCGACCAACTTTTTCCATATTATGCTGATATTCTTGGAGCCATTTTGCCTTGTGTATCTGATCAAGAAGAGAAAATTAGAGCTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCAATCAAGGCTGATCCAGCTGAATCGTTTGATGTAGGAGCTGTTCTCTCTATTGCTAGGAGGCAACTATCTAGTGAATTGGAGGCTACCCGGATTGAAGCTTTGCATTGGATATCAACCCTTCTAAACAGACACCGTGCTGAGGTTTTAACATTTCTGAATGACATATTTGACACCCTACTGAAAGCACTTTCTGATCCATCTGATGAGGTTGTACTTCTAGTTCTTGAAGTGCATGCGTGCATTGCTAAAGATCCTCAGCACTTCCGACAGCTTGTTGTTTTCCTAGTCCACAAGTTCCGTGTGGATAATTCTCTCTTAGAGAAGCGTGGTGCTTTGATAATTCGTCGACTTTGTGTGCTTTTAGATGCTGAAAGAGTCTACCGGGAACTATCTACAATACTTGAAGGAGAATCTAATCTAGATTTTGCATCGGTTATGGTTCAGGCTTTGAATTTGATCTTACTCACCTCGTCAGAATTATCTGAGCTTCGAGCTCTTTTGAAACAATTAGTGGCAAATCCTGCTGGGAAGGACTTGTATGTTTCTTTGTATGCTTCATGGTGCCATTCTCCAATGGCAATTATAAGCCTCTGCTTCTTAGCTCAGACCTACCAACATGCTAGTGCTGTGATTCAGTCTCTAGTTAAGGAGGATATTAATGTCAAATTCTTGGTCGAACTGGATAAGCTAATTCGCTTGCTGGAAACCCCAATCTTTTCCTATCTAAGATTGCAGCTTCTTGAACCTGGAAGATATATATGGTTATTTAAGGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCATTTAAGATTCTAAAAACCCGTCTTAAAGCTGTGCCACCTTATTCTTTAAACGGCGAGCAATTGAGGAGAACATCCTCAGGGAATCCCTACCAAATTCTTCATCACATGACCGGTGGATCTCAAATCACTGAGGATGGGGACATAGTTGTGGATGTTGGCAACTCAGATAATGGAATCAATTTTGCTGCAAGGCTACAACAGTTTGAGCAAATGCAGAACCAGCATCGCATGCATGCTAGAGCTCGCAATAGTTCCACTTCTGTGTCAAAGAATCATATGGAGGACGCACAGAAAGTGGAAGAATCAAGGCAACGCTTGTCAGATGTTCGTGTTTCTTCTCCAAGATCATAA 2142 0.4178 MADAFSVIPAAVLRNLADKLYEKRKNAALEVEGIVKQLAANSETDKITAVISMLTTEYTCSVQANHRKGGLIGLAAATVGLSTEASRYLEQIVPPVLGAFADPDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADSDPSVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALCEFLQEIKNSPSVDYGRMAEILIQRAGSPDEFTRLTAITWINEFVKLGGDQLFPYYADILGAILPCVSDQEEKIRAVARETNEELRAIKADPAESFDVGAVLSIARRQLSSELEATRIEALHWISTLLNRHRAEVLTFLNDIFDTLLKALSDPSDEVVLLVLEVHACIAKDPQHFRQLVVFLVHKFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGESNLDFASVMVQALNLILLTSSELSELRALLKQLVANPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVKEDINVKFLVELDKLIRLLETPIFSYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPPYSLNGEQLRRTSSGNPYQILHHMTGGSQITEDGDIVVDVGNSDNGINFAARLQQFEQMQNQHRMHARARNSSTSVSKNHMEDAQKVEESRQRLSDVRVSSPRS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1705 713 FunFam ARM repeat superfamily protein 5 125 - -
Lele50g1705 713 SUPERFAMILY ARM repeat 6 537 IPR016024 -
Lele50g1705 713 MobiDBLite consensus disorder prediction 669 713 - -
Lele50g1705 713 MobiDBLite consensus disorder prediction 690 707 - -
Lele50g1705 713 Gene3D - 205 337 IPR011989 -
Lele50g1705 713 Gene3D - 7 204 IPR011989 -
Lele50g1705 713 FunFam protein VAC14 homolog 126 248 - -
Lele50g1705 713 FunFam protein VAC14 homolog isoform X1 249 410 - -
Lele50g1705 713 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Lele50g1705 713 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Lele50g1705 713 Gene3D - 345 502 IPR011989 -
Lele50g1705 713 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Lele50g1705 713 PANTHER TAX1 BINDING PROTEIN-RELATED 7 692 IPR026825 GO:0006661|GO:0070772
Lele50g1705 713 MobiDBLite consensus disorder prediction 669 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1705 Lele-ChrLele50 21890340 21904653 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1705 50 21890340 21904653 Lele50g1705 50 21890340 21904653 ECH
Lele50g1705 50 21890340 21904653 Lele51g1154 51 7614122 7623090 hybridization
Lele50g1705 50 21890340 21904653 Lele52g1665 52 20297854 20307610 hybridization