Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1569 ATGGTTTGGTTCTGTTTGTCACTAGGCGTTTTGGGACATTGTCTTTCACTTGCAGGTGTTTATCAGGTTCAGTTAGATGCAGAACAACAGAAAGTGACAGTTTCAGGAAGTGTTGATTCTGCAACATTGATCAAGAAACTGGTGAGAGCTGGGAAATATGCAGAACTTTGGTCACAGAAAACAAATCAGAACCAGAAGCTGAATAACAACAACAACATCAGCAATAATAACAACTGCTTGAAGAATAATGACAAGAACCAGAAGGGTCAAAAGCAGCAAGGACAGGTTAACAAGGGGCTTGAAGCATTCAACAACGACCAGCAGAAGTTTAAATTCCATGCTTTTAGTTCTGAAGAAGATGATGAGCTGTACGAAGACGACGAAGACGATGAAGAAGACTGTGAAGATGATGATGATGGGCTAAGGTTCATCAGTGAGAAGGCTACTAATCAACTGGATTTGATCAAGCAGCAGCAAGCAGCTAGTTCTGCAAAGAATGCAAAGAAAAATGCAGGAGCCATGAATCCAGCAAACAATAATAGCAATGCCAATGGTGGCAAGAAAGTAAGCTTTGATCCAAAAGCCGTGGCTGCTCTGAAAGTAAACAGTAATGCCAATCTGGGAAGTGAAAGTATTAGTCTTGGAGAACAACCCAGAAGGGTAACAAATGACATAGGTTCTATGATGAGTCTTGCTGGTTTTAATGGAAATAACAATAATGCAAACAATTCTGGATTTGGAGGATTTCAAGTTCAGTCCAACCATGGAATCATCCCAAATGGTGGTTTTCTCACAAATCAGCAATACCCATCACCATCTTCTTCATCATCTTCTTTTCTGATGAACATGAATGATTTTAGTAATAATAATCATCCATCTTCATTGATGATGAACATGAAGCAACAACCACCCCAGATGACGTATCAAAGGGCTCCATTTGTTCCTCCTAGCACTGGATATTACTGGAACAACAGCTGCAACTATTATAATTATGATAATTACAGTGCTGCCATTCCCAGTTACTCTCATCTTCAGCTACCTAATTACTGTAGGGAAGATCGCTATGCAGCTGATATGTTCAGTGATGACAACACTAACAGCAACTGCTCAGTTATGTAA 1119 0.3986 MVWFCLSLGVLGHCLSLAGVYQVQLDAEQQKVTVSGSVDSATLIKKLVRAGKYAELWSQKTNQNQKLNNNNNISNNNNCLKNNDKNQKGQKQQGQVNKGLEAFNNDQQKFKFHAFSSEEDDELYEDDEDDEEDCEDDDDGLRFISEKATNQLDLIKQQQAASSAKNAKKNAGAMNPANNNSNANGGKKVSFDPKAVAALKVNSNANLGSESISLGEQPRRVTNDIGSMMSLAGFNGNNNNANNSGFGGFQVQSNHGIIPNGGFLTNQQYPSPSSSSSSFLMNMNDFSNNNHPSSLMMNMKQQPPQMTYQRAPFVPPSTGYYWNNSCNYYNYDNYSAAIPSYSHLQLPNYCREDRYAADMFSDDNTNSNCSVM 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1569 372 MobiDBLite consensus disorder prediction 119 138 - -
Lele52g1569 372 MobiDBLite consensus disorder prediction 61 95 - -
Lele52g1569 372 SUPERFAMILY HMA, heavy metal-associated domain 15 58 IPR036163 GO:0046872
Lele52g1569 372 CDD HMA 17 55 IPR006121 GO:0046872
Lele52g1569 372 MobiDBLite consensus disorder prediction 161 187 - -
Lele52g1569 372 Gene3D - 9 64 - -
Lele52g1569 372 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 17 372 - -
Lele52g1569 372 MobiDBLite consensus disorder prediction 115 138 - -
Lele52g1569 372 MobiDBLite consensus disorder prediction 161 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1569 Lele-ChrLele52 19572437 19573555 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1569 52 19572437 19573555 Lele52g1569 52 19572437 19573555 ECH
Lele49g1222 49 8179913 8186921 Lele52g1569 52 19572437 19573555 hybridization
Lele50g1612 50 21169392 21173991 Lele52g1569 52 19572437 19573555 hybridization