Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1222 ATGGACAAGAAGAACAGACGGAAGGATGATTCTTCCGTGGATATGAGGAAAAGCCCGTCGATTCTCCGGAAATTGCAGGAAAGCAAGCTCAGGGAAGCACTTGAAGAAGCTTCTGAAGATGGGAAGCTCGTCATTTCTCAAGACATGGAAGCTTTGTCGCCTGAAAACAATGACGAAAGCCTCGGGAGATCTCGGTCACTTGCCAGGCTTCAAGCTCAGCAAGAATTTCTTCGAGCCACCGCACTCGCCGCCGAGCGCATATTTGAGTCTAAGGAGGAAATTCCTACTCTTCAAGAAGCCTTCAACAAATTCCTCACAATGTACCCTAAATACCAGTCGTCGGAGAAGATCGATCAGTTGAGGTCGGACGAGTATTCGAACTTGTCCCCAAAGGTATGCCTTGATTACTGTGGATTTGGGTTGTTCTCTTTCGTTCAGACCATTCATCACTGGGAATCCTCTACATTTAGTTTGTCTGAGATAACTGCGAATTTATGTAATCATGCGCTTTATGGTGGTGCTGAAAAGGGAACCGTGGAACATGATATGAAGACTAGAATCATGGATTACTTGAACATGCCTGAGAATGAGTATGGCCTTGTGTTTACTGTTAGTAGAGGATCGGCTTTTAAATTGCTGGCTGAATCATACCCTTTCCAAACAAACAAAAAATTGCTGACCATGTTCGACCATGAGAGCCAGTCTGTGGCTTGGATGGCTCAGTGTGCCAGGGAGAAGGGTGCTAAGGTTCACAGTGCATGGTTTAGATGGCCAACCCTCAAACCATGTTCCACTGATTTGAGAAAACAGATTACGAGCAAGAAGAGGAGGAAGAAGGATTCGGCGACCGGTCTTTTTGTGTTCCCTGTTCAGTCTAGAGTAAGTGGGGCTAAGTATTCTTACCAGTGGATGGCTCTAGCGCAGCAGAATAACTGGCATGTCTTGCTTGATGCAGGATCATTGGGTCCTAAGGACATGGATTCCCTTGGGTTGTCTCTATTCCGGCCTGATTTTATAATCACATCTTTTTACAGGGTGTTCGGGTATGATCCCACGGGATTTGGATGTCTTCTGATCAAGAAATCGGTCATGGCAAGCCTTCAAAATCAGTCAGGGAGTACTGGGTCTGGAATGGTGAAGATCACTCCTGAGTTTCCTATGTATTTGGGTGACTCTGTTGATGGTTTGGACAAATTGACTGGGATTGAAGATGATGAAGAAGTCACTGGGATTGGTGATAAAACTGATGAAACTCGTCAGGGTTCACAGTTGCCTGCTTTTTCTGGAGCATATACGTCTGCTCAGGTCCGAGAAGTATTTGAGACTGAAATGGATCAGGATAGTTCTGAAAGAGATGGAACTAGCACTATATTGGAAGAAACTGAGAGTATTTCTGTTGGGGACTTGATGAAGAGCCCTGTCTTCAGTGAAGATGAGTCTTCTGACAACTCTTTTTGGATTGATTTGGGACATAGTCCTCTGGAATCTGACCACACAGTTCAATTGAATAAACAGAAGATAGCTTCTCCTCTTCCACCCTTTTGGTTCAATGGAAAGAGGAATCAAAAGCATCATTCTCCTAAGCCAACTTCCAAGATATATGGCAGTCCCATGTATGATGACAAAGTGGTAAATCATGATCCTCATAATGATCACCATGTGCTTTCATTTGATGCAGCCGTGCTATCAGTGTCACATGAACTAGACTGGGTAAAAGAAGTCCCTGAAGAGGAACATGTTGCTGAAGCGAGTGATTTTTCACGAAATGGTAAAGGGTCTGATCATTTGTATGTCAATGAGATTGAGGAAGAACCTGGAAGTAGTGAAGCTGTTCAACAAGATGCTCCTTCGAAAGGATCAGGACTTGATAATTCATTTTCTGCTGCTCAGCATCTCCGCTTTGAAAATGGCTGTACCTCTGAGATATCCTATGAGCTTAAAGAGAGTGTCATAAGAAGGGAAACTGAAGGTGAATTTAGATTGCTTGATAGAAGGGAAGGAAATCGACATGGTGGTGGTAGATTTTTTGGTTTGGATGAGAATGAAACTTACAAGGGAAGAAGAGTGTCATTTAGTATGGAAGATAACCGGAAAGACTATCTTAGCCATACATTGGAAACAGGGGACATATGTGGAACTAGCTTAGAGGATGATGAAGAGTACACAAGTGATGGAGAAGATGGTGATGAACAGGATTGGGGCAGGAGGGAACCAAATATAATATGCCGGCATTTGGATCATGTTAATATGCTTGGTCTCAATAAAACCACACTACGACTTCGGGTTTTGATAAATTGGCTTGTCACCTCTTTGTTGCAACTGAAGTTGCCAGGTGTTAAAGCAAATCTTGTACACATCTACGGACCAAAAATTAAATATGAAAGAGGTGCAGCTGTAGCTTTTAATATCAGGGACAGAAACAGGGGACTAATTAATCCTGAGATTGTTCAAAAGCTGGCTGAAAAAGAAGGAATCTCCCTTGGTATCGGTTTCCTCAGTCACATACGGATTCTTGATAACTCAAGAAATCATCACGGGTCTTCGAATCTTGAAGAGGCATCTCTTTGCAGGCCAATGGAGAATGGTCGTCGGGATGGAAAAGGCAGCTTTGTACGGGTTGAAGTTGTTACAGCGACACTTGGTTTTCTGACTAATTTTGAGGATGTGTATAAATTGTGGGCTCTTGTTGCTAAGTTTCTTAACCCATCATTTATTCAAGAAGGCAGTCTTCCCACCGTCGAAGAAGATAGCTGGTGTAATCTGCTTGAAGAATGGCTTGGTGATAATCATTTGTGTGCTGCCAGATGGAAGAACTCTTATCTTCACTTCAAAGCTTCACAGGGCCAGCTGGTGAATTTGGTGTTTATGAAGCAAAATGCGTGGGTAGAACCTCTATCAGTGTTCATTTTGCTTTTGTTCATACGTAAGGATTTGCAACTTCTGTACAAAGTTAGTGTTCATCTTATGCTGTTCTGTATGAGACGATCCAAATCCAATAGCTTTGTTGACTTAGATTTGACTTGTGCTAATAATGTCAAAACCATGTTTCTTCAGATTGTATGCTCTCCTGAAAGCTCTGAAGAAATGGCTAAAGATGACGACTTTAAGCTCCTCAAAATCCAGACATGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAACAGAAAGTGAAGAAACTACTTCAGAAAATTGAAGGTGTTTATCAGGTTCAGTTAGATGCAGAACAACAGAAAGTGACAGTTTCAGGAAGTGTTGATTCTGCAACATTGATCAAGAAACTGGTTAGAGCTGGGAAATATGCAGAACTTTGGTCACAGAAAACAAATCAGAACCAGAAGCAGAATAATAACAACATCAGCAATAATAACAACTGTGTCGAGAATAATGACAAGAACCAGAAGGGTCAAAAGCAACAAGGACAGATTAAAAAGGGGCTTGAAGCATTCAACAACAACCAGCAGAAGTTTAAATTCCCTGCTTTTAGTTCTGAAGATGATGAGTTGTACGAAGACGACGATGAAGATGAAGAAGACTGTGAAGATGATGATGGGCTAAGGTTCATCAGTGAGAAGGCTAATCAACTGAATTTGATCAAGCAGCAGCAGCAAGCAGCTAGTGCTGCAAAGAATGCAAAGAAAAATGCAGGAGCCATGAATCCAGCTGCTTCTTTCAACAATGGTGGCAAGGCAAACAGTAACAATAATAATGCCAAGAAAGTAAGCTTTGACCCAAAAGCCAGGGCTGCTCTGAAAGTAAACAGTAATGCCAATCTGGGAAGTGAAAGTCTGAATCTTGGAGAACAACCCAGAAGGGTTACAAATGACATAGGTTCTATGATGAGTCTTGCTGGTTTTAATGGAAATAACAACGCTGCAAACAATTCTGGATTTGGAGGATTTCAAGTTCAGTCCAACAATGGAATAATCCCAAATGGAGGTTTTCTCACAAATCAGCAATACCCATCACCATCTTCATCTTCTTTTCTGATGAACGTGAATGGTTTTAGTAATAATAATCATCCATCTTCATTGATGATGAACTTGAAGCAGCAACAACCACCACCCCAGGTGATGTATCAGAGAGCTCCATTAGTTCCTCCTAGCACTGGATATTACTGGAACAACGGCTACAACAATAATTATGATAATTACAGTGCGGCCATTCCCAGTTACTCTCATCTTCATCAGCTACCTAATTACTGTGGGGAAGATCACTATGCAGCTGATATGTTCAGTGATGACAACACTAACAGCAACTGTTCAGTTATGTAA 4275 0.4194 MDKKNRRKDDSSVDMRKSPSILRKLQESKLREALEEASEDGKLVISQDMEALSPENNDESLGRSRSLARLQAQQEFLRATALAAERIFESKEEIPTLQEAFNKFLTMYPKYQSSEKIDQLRSDEYSNLSPKVCLDYCGFGLFSFVQTIHHWESSTFSLSEITANLCNHALYGGAEKGTVEHDMKTRIMDYLNMPENEYGLVFTVSRGSAFKLLAESYPFQTNKKLLTMFDHESQSVAWMAQCAREKGAKVHSAWFRWPTLKPCSTDLRKQITSKKRRKKDSATGLFVFPVQSRVSGAKYSYQWMALAQQNNWHVLLDAGSLGPKDMDSLGLSLFRPDFIITSFYRVFGYDPTGFGCLLIKKSVMASLQNQSGSTGSGMVKITPEFPMYLGDSVDGLDKLTGIEDDEEVTGIGDKTDETRQGSQLPAFSGAYTSAQVREVFETEMDQDSSERDGTSTILEETESISVGDLMKSPVFSEDESSDNSFWIDLGHSPLESDHTVQLNKQKIASPLPPFWFNGKRNQKHHSPKPTSKIYGSPMYDDKVVNHDPHNDHHVLSFDAAVLSVSHELDWVKEVPEEEHVAEASDFSRNGKGSDHLYVNEIEEEPGSSEAVQQDAPSKGSGLDNSFSAAQHLRFENGCTSEISYELKESVIRRETEGEFRLLDRREGNRHGGGRFFGLDENETYKGRRVSFSMEDNRKDYLSHTLETGDICGTSLEDDEEYTSDGEDGDEQDWGRREPNIICRHLDHVNMLGLNKTTLRLRVLINWLVTSLLQLKLPGVKANLVHIYGPKIKYERGAAVAFNIRDRNRGLINPEIVQKLAEKEGISLGIGFLSHIRILDNSRNHHGSSNLEEASLCRPMENGRRDGKGSFVRVEVVTATLGFLTNFEDVYKLWALVAKFLNPSFIQEGSLPTVEEDSWCNLLEEWLGDNHLCAARWKNSYLHFKASQGQLVNLVFMKQNAWVEPLSVFILLLFIRKDLQLLYKVSVHLMLFCMRRSKSNSFVDLDLTCANNVKTMFLQIVCSPESSEEMAKDDDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQKIEGVYQVQLDAEQQKVTVSGSVDSATLIKKLVRAGKYAELWSQKTNQNQKQNNNNISNNNNCVENNDKNQKGQKQQGQIKKGLEAFNNNQQKFKFPAFSSEDDELYEDDDEDEEDCEDDDGLRFISEKANQLNLIKQQQQAASAAKNAKKNAGAMNPAASFNNGGKANSNNNNAKKVSFDPKARAALKVNSNANLGSESLNLGEQPRRVTNDIGSMMSLAGFNGNNNAANNSGFGGFQVQSNNGIIPNGGFLTNQQYPSPSSSSFLMNVNGFSNNNHPSSLMMNLKQQQPPPQVMYQRAPLVPPSTGYYWNNGYNNNYDNYSAAIPSYSHLHQLPNYCGEDHYAADMFSDDNTNSNCSVM 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1222 1424 MobiDBLite consensus disorder prediction 603 624 - -
Lele49g1222 1424 Pfam Heavy-metal-associated domain 1045 1098 IPR006121 GO:0046872
Lele49g1222 1424 MobiDBLite consensus disorder prediction 1206 1234 - -
Lele49g1222 1424 CDD HMA 1044 1103 IPR006121 GO:0046872
Lele49g1222 1424 SUPERFAMILY HMA, heavy metal-associated domain 1040 1106 IPR036163 GO:0046872
Lele49g1222 1424 SUPERFAMILY PLP-dependent transferases 162 376 IPR015424 -
Lele49g1222 1424 MobiDBLite consensus disorder prediction 713 727 - -
Lele49g1222 1424 MobiDBLite consensus disorder prediction 1108 1142 - -
Lele49g1222 1424 MobiDBLite consensus disorder prediction 610 624 - -
Lele49g1222 1424 Gene3D - 156 396 IPR015421 GO:0003824
Lele49g1222 1424 MobiDBLite consensus disorder prediction 1166 1182 - -
Lele49g1222 1424 Coils Coil 1110 1130 - -
Lele49g1222 1424 MobiDBLite consensus disorder prediction 1156 1182 - -
Lele49g1222 1424 Gene3D - 1040 1112 - -
Lele49g1222 1424 ProSiteProfiles Heavy-metal-associated domain profile. 1048 1104 IPR006121 GO:0046872
Lele49g1222 1424 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 98 883 - -
Lele49g1222 1424 MobiDBLite consensus disorder prediction 1 21 - -
Lele49g1222 1424 MobiDBLite consensus disorder prediction 1220 1234 - -
Lele49g1222 1424 MobiDBLite consensus disorder prediction 713 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1222 Lele-ChrLele49 8179913 8186921 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1222 49 8179913 8186921 Lele49g1222 49 8179913 8186921 ECH
Lele49g1222 49 8179913 8186921 Lele51g1240 51 8201933 8204004 hybridization
Lele49g1222 49 8179913 8186921 Lele52g1569 52 19572437 19573555 hybridization