Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1530 ATGAGTCACAACCTGAATCAACTTTGGTACGATATGGAGTTCATGTTTACTGATATTCCAAATGATTATTACATCGTTAGATTCAAGGAAGATAGTTACCGTGACAAGGTATTAAGGGAGGGTCCCTGGTTCATCATGGATCATTATCTCGCGGTGCGGCGGTGGATCCCAAATTTCACCCCTGGGATTCGGGACATTCCGATGAAAATGATCGTCTGGATTGGGACGTCACTGAGAGTGGATATGAACACTCCGATTCGAGGTCAGGGAGAGAAGTCCAAAGCTGAACGGCGAAGGTTTGCTCGAGTGAGCGTTGAAATCGATGTGCGTAGAAAGCTTAAACGGAGGTTCATGATTCGAAACGTTGTTTTCTCTGTCGATCGAATACGAAGGCAAGCCCGACGCCAGATGCTCCAACTGAGGAGGTTTCAGGGAAGCCACAGTAGCCGGAAAAGAAGACGTAGAAGAGGAGGAGGCGGAGCTCTGTGTAACCGGAATTGTACGGCGCAAAAAACTATGTCGAAGAAAGCAGAGAAGAAGCACCTGAATCAAATCCTCGGTTCCCACCTCTGCACTATCCATGAGACCCTTCAGGTTTTGGACCAAACTGCCTCTTCTTCTTTGGACAAAGTGAGGTGGGAGGAAATAATAAAGATGGGCGACCAAGTCTCAAAACAGGCTACCATAGCTGGAATGCTTTGGACTGGACAAAAACCAGAGGCAAAAGCAATGGAGGAAACTATGGCATCATACTTCAACACGTTACAAGGTTTCCTCTTGCTTTCCCATGGAAGTACTGTAGGTGCAGGGCCTACCCTGTCTTCCTGTATTCAAGCTTCTGTGAAGCAAGTTGTTGATTCCAGTTTTAGGCTGATGAAGGAATCTGCGTCTTTATATGGATCCCAAGGGAAAGATCAGCAACTATCAATCTCTCAATTAGTTGGTGTGGTATGGGAAGCATGTTCTGCTCTTAAAAAGACTCCATCAACAAATATTACAGCAATTGGGAGAGCAATGACTCAGGTTGCTGTTTCGATGAAGGATGTTCTTCGTGAGCTGAAAGAATTGAGGCCGGATTCAACTGATGAAGTTTCCGACAGCGATGGTGAACTGGGGAATGACCTTTCACCTGAAGAGATGAAAATCGCCCAAGCAGCAATCGTAGCTGTATCAGATACACTTTCGGTCGTAAAGGAGCTCATTCGCTGCATCTCGGGCTTGCTCAAGCTGGAAAAGCCGGGTGACAATGTGGACTTTGTAGATTCACTGGAGAAACTGTTGAAGCTGTGCCAGGATCTTAGTTTACTGATTGATGAAATTGGAGCTTGCCTCTATCCCCCTCAAGAGGTCCCCACCCTAGAAGCAGCTATAATGAAAATCCAGAGCGTTATTGATGATATGCAAGGAATATTAGGAGGACTCGGAGGAGCACCAGACACATTCCTTGAGGCGTGCAATGTTTTAAGGAGTTCACTGAGACAGCTTGCATCTGAACTAAGTAATTCTGCTACTGCTGATCTAGAAGGCAAAGTGGAAAACATTACGTTAAGCAATTAA 1557 0.4573 MSHNLNQLWYDMEFMFTDIPNDYYIVRFKEDSYRDKVLREGPWFIMDHYLAVRRWIPNFTPGIRDIPMKMIVWIGTSLRVDMNTPIRGQGEKSKAERRRFARVSVEIDVRRKLKRRFMIRNVVFSVDRIRRQARRQMLQLRRFQGSHSSRKRRRRRGGGGALCNRNCTAQKTMSKKAEKKHLNQILGSHLCTIHETLQVLDQTASSSLDKVRWEEIIKMGDQVSKQATIAGMLWTGQKPEAKAMEETMASYFNTLQGFLLLSHGSTVGAGPTLSSCIQASVKQVVDSSFRLMKESASLYGSQGKDQQLSISQLVGVVWEACSALKKTPSTNITAIGRAMTQVAVSMKDVLRELKELRPDSTDEVSDSDGELGNDLSPEEMKIAQAAIVAVSDTLSVVKELIRCISGLLKLEKPGDNVDFVDSLEKLLKLCQDLSLLIDEIGACLYPPQEVPTLEAAIMKIQSVIDDMQGILGGLGGAPDTFLEACNVLRSSLRQLASELSNSATADLEGKVENITLSN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1530 518 Pfam Grap2 and cyclin-D-interacting 215 468 - -
Lele52g1530 518 Gene3D Talin, central domain 164 324 - -
Lele52g1530 518 PANTHER CYCLIN D1-BINDING PROTEIN 1 176 505 IPR026907 GO:0051726
Lele52g1530 518 Pfam Domain of unknown function (DUF4283) 13 74 IPR025558 -
Lele52g1530 518 Gene3D I/LWEQ domain 327 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1530 Lele-ChrLele52 19329382 19333819 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1530 52 19329382 19333819 Lele52g1530 52 19329382 19333819 ECH
Lele49g1250 49 8360572 8361624 Lele52g1530 52 19329382 19333819 hybridization
Lele50g1577 50 20946727 20949798 Lele52g1530 52 19329382 19333819 hybridization