Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1577 ATGTCGAAGAAAGCAGAGAAGAAGCACCTGAATCAAATCCTCGGTTCCCACCTCTGCACTATCCATGAGACCCTTCAGGTTTTGGATCAAACTGCTTCTTCTTCTTTGGACAAAGTGAGCTGGGAGGAAATAATAAAGATGGGCGACCAGGTCTCAAAACAGGCTACCATAGCTGGAATGCTTTGGACTGGACAAAAACCAGAGGCAAAAGCAATGGAGGAAACTATGGCATCATACTTCAACACGTTACAAGGTTTCCTCTTGCTTTCCCATGGAAGTACTGTAGGTGCGGGGCCTACACTGTCTTCCTGTATTCAAGCTTCTGTGAAGCAAGTTGTTGATTCCAGTTTTAGGCTGATGAAGGAATCTGTGTCTTTATATGGATCTCAAGGGAAAGATCAGCAATTATCAATCAATCAATTAGTTGGTGTGGTATGGGAGGCATGTTGTGCTCTTAAAAAGACTCCATCAACAAATATTACAGCAATTGGGAGAGCGATGACTCAGGTTGCTGTTTCGATGAAGGATGTTCTCCGTGAGCTGAAAGAATTGAGGCCGGATTCAACTGATGAAGTTTCTGACAGCGATGGTGAACTGGGGAATGACCTTTCACCTGAAGAGATGAAAATCGCCCAAGCAGCAATCGTAGCTGTGTCAGATACACTTTTGGTCGTAAAGGAGCTCATTCGCTGCATCTCGGGCTTGCTTAAGCTGGAAAAGCCGGGTGACAATGGTGATTTTGTAGATTCACTGGAGAAACTCTTGAAGCTGTGTCAGGATCTTAGTTTACAGATTGATGAAATTGGAGCTTGCCTCTATCCGCCTCAAGAGGTCCCCACCATAGAAGCAGCTATAGTGAAAATCCAGTGTGTTATTGATGATATGCAAGGAATATTAGGAGGACTCGGAGGAGCACCAGACACATTCCTTGAGGCGTGCAATGTTTTAAGGAGTTCACTGAGACAGCTTGCATCTGAATTAAGTAATTCTGCTACTGCTGATCTAGAAGGCAAAGTGGAAAACATTACGTTAAGCAATTAA 1041 0.44 MSKKAEKKHLNQILGSHLCTIHETLQVLDQTASSSLDKVSWEEIIKMGDQVSKQATIAGMLWTGQKPEAKAMEETMASYFNTLQGFLLLSHGSTVGAGPTLSSCIQASVKQVVDSSFRLMKESVSLYGSQGKDQQLSINQLVGVVWEACCALKKTPSTNITAIGRAMTQVAVSMKDVLRELKELRPDSTDEVSDSDGELGNDLSPEEMKIAQAAIVAVSDTLLVVKELIRCISGLLKLEKPGDNGDFVDSLEKLLKLCQDLSLQIDEIGACLYPPQEVPTIEAAIVKIQCVIDDMQGILGGLGGAPDTFLEACNVLRSSLRQLASELSNSATADLEGKVENITLSN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1577 346 PANTHER CYCLIN D1-BINDING PROTEIN 1 4 333 IPR026907 GO:0051726
Lele50g1577 346 Pfam Grap2 and cyclin-D-interacting 43 296 - -
Lele50g1577 346 Gene3D Talin, central domain 2 152 - -
Lele50g1577 346 Gene3D I/LWEQ domain 155 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1577 Lele-ChrLele50 20946727 20949798 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1577 50 20946727 20949798 Lele50g1577 50 20946727 20949798 ECH
Lele50g1577 50 20946727 20949798 Lele51g1266 51 8371921 8374527 hybridization
Lele50g1577 50 20946727 20949798 Lele52g1530 52 19329382 19333819 hybridization