Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1250 ATGCTTCGCTGGTTAAATCTGTTTAGAGGATCTCCCGAGAAAGATCAGCAACTATCAATCTCTCAATTAGTTGGTGTGGTATGGGAAGCATGTTCTGCTCTTAAAAGGACTCCGTCAACAAATATTACAGCAATTGCTGTTTTCGATGAAGTCGTAAAGGAGCTCATTGACAATGGTTATTTTGTAGATTCACTGGAGAAACTGTTGAAGCTGTGTCAGGAACTTAGTTTACAGATTGATAAAATTGGAGCTTACCTCTATCCTCCTCAAGAGGTCCCCGCCATAGAAGCAGCTATAGTGAAAATCCAGAACGTTATTTATGATATGCAAGGAGTATTAGGAGGACTCAGAGGAGAATCAGACACATTCCTTGAGGCATGCAATGTTTTAAGGAGTTCACTGAACCTGAATTAA 414 0.401 MLRWLNLFRGSPEKDQQLSISQLVGVVWEACSALKRTPSTNITAIAVFDEVVKELIDNGYFVDSLEKLLKLCQELSLQIDKIGAYLYPPQEVPAIEAAIVKIQNVIYDMQGVLGGLRGESDTFLEACNVLRSSLNLN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1250 137 Pfam Grap2 and cyclin-D-interacting 57 110 - -
Lele49g1250 137 Pfam Grap2 and cyclin-D-interacting 11 55 - -
Lele49g1250 137 PANTHER CYCLIN D1-BINDING PROTEIN 1 58 135 IPR026907 GO:0051726
Lele49g1250 137 Gene3D I/LWEQ domain 10 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1250 Lele-ChrLele49 8360572 8361624 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1250 49 8360572 8361624 Lele49g1250 49 8360572 8361624 ECH
Lele49g1250 49 8360572 8361624 Lele51g1266 51 8371921 8374527 hybridization
Lele49g1250 49 8360572 8361624 Lele52g1530 52 19329382 19333819 hybridization